Gene SO_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1539 
Symbol 
ID1169347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1614418 
End bp1616007 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content48% 
IMG OID637343466 
Producthypothetical protein 
Protein accessionNP_717155 
Protein GI24373112 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCCA GCTCTGACTT ACCCTATCGC AAGATGATCA CTTGGGCGGG TTTTTACCAA 
GATTACTACT TGGTGGATAT CAACACTGGC CGCAAGTTAC CACTGCTAAC CCAACAACCC
AGCGATTCAG ATCCGAGCTT ATCGGGTGAT GGCAAATTTG TGGTTTATTA TCAACAAGGT
CATGTGTATT TATACGATAT TGCCCAAGGA CGTCGCACCA ATTTGACCCA GTCTTTAAAG
GTGAGTTTTG CCGATGAAGA CCATGATTAT CCATCCAATG CGCCAGGTTA TGGTTTTGGC
CCTTGGCTTA AGGATGATGC AGGGATCCTC GTCTACGATA AATTTGATGT GTGGCAGTTT
AACACCGCAT CTAAAACAGG TTTTGCTTTA ACCGCAGGGC AGGGACGTGC TCAAAAAATT
CAATATCGCC TCGAAGGCTT AGTCGATAAT CCCGATGAGC CAACGACGCT AGCCTACAAC
GCTACTGTGC TGCTCCATGG TTACAGCGAC AAGACTAAGG CCGATGGTTT TTACCAAGCG
ACCTTAGGCG AAGCGGGCGT TAAGACCTTG ATGGAAGGTG AGTATAAGTT AACAGTGCTT
GGGCGCAGTA AAGATACCGA TACCTTGGTG TTTTCCAAGG AGCGATTTGA TCTCTTCCCC
GATTTATACA CCGCAAGCTA TCAAGCGCCA CAACAAGCGG TGAAGCAAAC CGATTTAGAT
AAACAGCGCC AAGCCTTTAA CTGGAGCCAA GCCGAATTAG TGCATTGGAC CAACGGCGAT
GGTAAACCGC TCGATGGTGT GTTGATAAAA CCAACCAACT ATCAAGCGGG CGAGCGTTAT
CCTGTGCTGG TGTACTACTA TGAATTGATG ACCGACAGAC TGCACGCCTT CCCGCAAATG
AAGGTCAACC ACAGACCCAA CTTTGCTTGG TATGTCAATA ATGGTTACGC GTTATTCTTG
CCGGATATTC GTTTCGATAT TGGCTATCCC GGTGCCAGCT CAGTACAAAC ATTGACCTCG
GGTGTGCAAA AGCTTATCGA TATGGGCGTT GCCGATGCTA ACGCCATTGG ATTACAAGGA
CATTCTTGGA GTGGCTATCA AACGGCCTTT GCCATCACCC AAACTAAAAT GTTTAAAGCC
GCCGTTGCTG GCGCCCCAGT GGCGAACATG ACCAGTGCCT ACAATGGAAT TCGCCATGGC
ACAGGCATTG CGCGCCAGTT CCAATATGAA ACCGGCCAAA GCCGCATTGG TGCAAGTTTA
TTTGCGGCGC CACAAAAATA CATTGAGAAC TCGCCCGTGT TTTATGCCGA TCGCATTAAA
ACGCCGTTGA TGATCATGTT TGGCGATAAA GACGATGCGG TGCCCTGGGA GCAAGGTGTT
GAAATGTACT TAGCCATGCG CCGTGCGGGT AAAGATGTGG TGTTTTTGCA ATATGAAGAT
GAGCCACATC ATCTAAAGAA ATATCCTAAT AAACTCGATT ACAGCATTCG GATGATGGAA
TACTTCGACC ATTACCTAAA AGGTAAACCC GCGCCAGCCT GGTTAAGCCA AGGCGAAGCC
TATGTCGAAT ATAAAGCCGA TGATGAGTAA
 
Protein sequence
MLASSDLPYR KMITWAGFYQ DYYLVDINTG RKLPLLTQQP SDSDPSLSGD GKFVVYYQQG 
HVYLYDIAQG RRTNLTQSLK VSFADEDHDY PSNAPGYGFG PWLKDDAGIL VYDKFDVWQF
NTASKTGFAL TAGQGRAQKI QYRLEGLVDN PDEPTTLAYN ATVLLHGYSD KTKADGFYQA
TLGEAGVKTL MEGEYKLTVL GRSKDTDTLV FSKERFDLFP DLYTASYQAP QQAVKQTDLD
KQRQAFNWSQ AELVHWTNGD GKPLDGVLIK PTNYQAGERY PVLVYYYELM TDRLHAFPQM
KVNHRPNFAW YVNNGYALFL PDIRFDIGYP GASSVQTLTS GVQKLIDMGV ADANAIGLQG
HSWSGYQTAF AITQTKMFKA AVAGAPVANM TSAYNGIRHG TGIARQFQYE TGQSRIGASL
FAAPQKYIEN SPVFYADRIK TPLMIMFGDK DDAVPWEQGV EMYLAMRRAG KDVVFLQYED
EPHHLKKYPN KLDYSIRMME YFDHYLKGKP APAWLSQGEA YVEYKADDE