Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1539 |
Symbol | |
ID | 1169347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1614418 |
End bp | 1616007 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637343466 |
Product | hypothetical protein |
Protein accession | NP_717155 |
Protein GI | 24373112 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCCA GCTCTGACTT ACCCTATCGC AAGATGATCA CTTGGGCGGG TTTTTACCAA GATTACTACT TGGTGGATAT CAACACTGGC CGCAAGTTAC CACTGCTAAC CCAACAACCC AGCGATTCAG ATCCGAGCTT ATCGGGTGAT GGCAAATTTG TGGTTTATTA TCAACAAGGT CATGTGTATT TATACGATAT TGCCCAAGGA CGTCGCACCA ATTTGACCCA GTCTTTAAAG GTGAGTTTTG CCGATGAAGA CCATGATTAT CCATCCAATG CGCCAGGTTA TGGTTTTGGC CCTTGGCTTA AGGATGATGC AGGGATCCTC GTCTACGATA AATTTGATGT GTGGCAGTTT AACACCGCAT CTAAAACAGG TTTTGCTTTA ACCGCAGGGC AGGGACGTGC TCAAAAAATT CAATATCGCC TCGAAGGCTT AGTCGATAAT CCCGATGAGC CAACGACGCT AGCCTACAAC GCTACTGTGC TGCTCCATGG TTACAGCGAC AAGACTAAGG CCGATGGTTT TTACCAAGCG ACCTTAGGCG AAGCGGGCGT TAAGACCTTG ATGGAAGGTG AGTATAAGTT AACAGTGCTT GGGCGCAGTA AAGATACCGA TACCTTGGTG TTTTCCAAGG AGCGATTTGA TCTCTTCCCC GATTTATACA CCGCAAGCTA TCAAGCGCCA CAACAAGCGG TGAAGCAAAC CGATTTAGAT AAACAGCGCC AAGCCTTTAA CTGGAGCCAA GCCGAATTAG TGCATTGGAC CAACGGCGAT GGTAAACCGC TCGATGGTGT GTTGATAAAA CCAACCAACT ATCAAGCGGG CGAGCGTTAT CCTGTGCTGG TGTACTACTA TGAATTGATG ACCGACAGAC TGCACGCCTT CCCGCAAATG AAGGTCAACC ACAGACCCAA CTTTGCTTGG TATGTCAATA ATGGTTACGC GTTATTCTTG CCGGATATTC GTTTCGATAT TGGCTATCCC GGTGCCAGCT CAGTACAAAC ATTGACCTCG GGTGTGCAAA AGCTTATCGA TATGGGCGTT GCCGATGCTA ACGCCATTGG ATTACAAGGA CATTCTTGGA GTGGCTATCA AACGGCCTTT GCCATCACCC AAACTAAAAT GTTTAAAGCC GCCGTTGCTG GCGCCCCAGT GGCGAACATG ACCAGTGCCT ACAATGGAAT TCGCCATGGC ACAGGCATTG CGCGCCAGTT CCAATATGAA ACCGGCCAAA GCCGCATTGG TGCAAGTTTA TTTGCGGCGC CACAAAAATA CATTGAGAAC TCGCCCGTGT TTTATGCCGA TCGCATTAAA ACGCCGTTGA TGATCATGTT TGGCGATAAA GACGATGCGG TGCCCTGGGA GCAAGGTGTT GAAATGTACT TAGCCATGCG CCGTGCGGGT AAAGATGTGG TGTTTTTGCA ATATGAAGAT GAGCCACATC ATCTAAAGAA ATATCCTAAT AAACTCGATT ACAGCATTCG GATGATGGAA TACTTCGACC ATTACCTAAA AGGTAAACCC GCGCCAGCCT GGTTAAGCCA AGGCGAAGCC TATGTCGAAT ATAAAGCCGA TGATGAGTAA
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Protein sequence | MLASSDLPYR KMITWAGFYQ DYYLVDINTG RKLPLLTQQP SDSDPSLSGD GKFVVYYQQG HVYLYDIAQG RRTNLTQSLK VSFADEDHDY PSNAPGYGFG PWLKDDAGIL VYDKFDVWQF NTASKTGFAL TAGQGRAQKI QYRLEGLVDN PDEPTTLAYN ATVLLHGYSD KTKADGFYQA TLGEAGVKTL MEGEYKLTVL GRSKDTDTLV FSKERFDLFP DLYTASYQAP QQAVKQTDLD KQRQAFNWSQ AELVHWTNGD GKPLDGVLIK PTNYQAGERY PVLVYYYELM TDRLHAFPQM KVNHRPNFAW YVNNGYALFL PDIRFDIGYP GASSVQTLTS GVQKLIDMGV ADANAIGLQG HSWSGYQTAF AITQTKMFKA AVAGAPVANM TSAYNGIRHG TGIARQFQYE TGQSRIGASL FAAPQKYIEN SPVFYADRIK TPLMIMFGDK DDAVPWEQGV EMYLAMRRAG KDVVFLQYED EPHHLKKYPN KLDYSIRMME YFDHYLKGKP APAWLSQGEA YVEYKADDE
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