Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1536 |
Symbol | |
ID | 1169344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1610608 |
End bp | 1611693 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343463 |
Product | putative RNA 2'-O-ribose methyltransferase |
Protein accession | NP_717152 |
Protein GI | 24373109 |
COG category | [R] General function prediction only |
COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACC TATTTTTATT TTGCCGTGCA GGCTACGAGA AAGAATGCGC AGCAGAAATC CAACAGCGAG CCGCCGAGCT CAATGTGGGT GGCTTTGTTA AGACCAATAA TAACGACGCC TATGTGGTAT ACCAATGTTT TGAAGACGAT GGTGCCGATA CGTTAGTTAA GCAACTGCCG TTAGATTCGC TGATTTTTGC CCGTCAAATG TTCGCTGCGA GCGAGTTATT GGCTGATTTA CCGGAGTCTG ACCGCGTTAG CCCAATTGTG GCCGCGCTCA GCGAAGTGAG CAAAGCGGGT GAGCTTAGGG TTGAAACTCC TGATACCAAC GAAGCGAAAG AACTCTCGGC ATTTTGCCGC AAGTTTACTG TGCCTTTGCG CCAGCATTTG AAAAAGTCGG GCAGTTTACT CGCGCAGGAA AATCCTAAAC GGCCGATTAT TCATGTGTGT TTTATTGGCC CAGGACGCGC CTACGCTGGT TATTCGCTCA GCAACAATAG CTCACCCAAT TTTATGGGGA TCCCGCGTCT TAAAATGGCC GCCGATGCAC CGAGCCGTTC TAGCCTGAAG CTCGATGAAG CGTTCGCGCA GTTTGTGCCT AAAGAAGAAC AGGAAGAACG TGTTCGCAGC GGTATGAATG CGGTGGATTT AGGCGCGTGT CCTGGCGGCT GGACCTACCA ACTGGTGCGT CGTGGCATGT TTGTGTCGGC GGTGGATAAC GGCCCTATGA ATGAAAAGCT GATGGAAACC GGCCAAGTAA AACATTTCCG CGAAGATGGT TTTCGCTTCG AGCCACAGCG CAAAAACATT TATTGGTTAG TGTGTGATAT GGTGGAAAAA CCAGCGCGTG TGGCTGAGCT GATTGAGGCA TGGGCAATTA ATGGTTGGTT TAAGGAAGCG ATTTTTAACC TCAAGTTGCC GATGAAGAGT CGTTATAAAG AAGTGATGGC GATTTTAAAC ACCATGCAAG ACATCCTCAA GGAAAACGGC ATCACTGAAT TTAAACTCCA GTGCAAGCAT TTATACCATG ACCGTGACGA AGTGACGGTG CACTTATGGC TTAAACCAAG CCAGCCTTGG AACTAA
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Protein sequence | MKNLFLFCRA GYEKECAAEI QQRAAELNVG GFVKTNNNDA YVVYQCFEDD GADTLVKQLP LDSLIFARQM FAASELLADL PESDRVSPIV AALSEVSKAG ELRVETPDTN EAKELSAFCR KFTVPLRQHL KKSGSLLAQE NPKRPIIHVC FIGPGRAYAG YSLSNNSSPN FMGIPRLKMA ADAPSRSSLK LDEAFAQFVP KEEQEERVRS GMNAVDLGAC PGGWTYQLVR RGMFVSAVDN GPMNEKLMET GQVKHFREDG FRFEPQRKNI YWLVCDMVEK PARVAELIEA WAINGWFKEA IFNLKLPMKS RYKEVMAILN TMQDILKENG ITEFKLQCKH LYHDRDEVTV HLWLKPSQPW N
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