| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1506 |
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| Symbol | |
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| ID | 1169316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1580143 |
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| End bp | 1581489 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343436 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_717123 |
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| Protein GI | 24373080 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAA TTTCCCATAG CGCAACGGAT CAACGCCTGC TGCAAGAGCC GATCGCTAAG
CTTTTCTGGC GCTATACCAT ACCGACAATC GCCTCCATGC TGGTGACAGG GGTGTATGTC
ACAATCGATG GGATCTTCGT GGGTCACTAT CTGGGTGAAA CGGGGCTTGC GGGCATGATG
TTAGCCTATC CCGTCGGCGC GATTTTATAT GCCATCGGCG CCATGATTGG CATGGGCAGC
GCGGCCTTAG TCTCAATCAA CCTTGGGCAA GGCAATGTTG CCAAGGCACG TAAATTACTC
GGTAATGCCT TTAGTTTATG TTTATTAGCG GGGGCATTTT TTGCTTTAGT GGGTGGGGTC
TTCTCTCGGG ATATTTTAAT TGCCCTTGGC GCTGAAGGAG AGATTCTCGA AAACGCCAAC
GAATACTTAT TCTGGTATTT TGCGCTATGC CATTTCCCCA TCATTTCAAT GGCATTTACC
ACCTTGTTGC GTAATGACGG TCGCCCGTCC ATGGTCACCT TCGTACTGAT CTTAGGCGGT
GTGCTTAACA CCTTTTTAGA TTGGCTGTTT ATTGTGGTGT TTCCCTTTGG ATTAGCGGGC
GCGGCGATTG CGACCATGCT GTCACAGGCG GTCACCGGAC TGCTATGTTT GCAGCATTTT
TTTGGCGCGC GTACTCAGCT CAAAATCAAC CTCGAGCAGA TGAAGCTTAA GCTTGATAAC
TGCATCAATA TCGCCCGTGT TGGATTACCA AGCTTCTTGA TGAACTTGTA TCTGTCGATT
GTGTTAACCT TGCACAACAC GGCTTTTTTG TGGGTTGGCG GTCCATTGCA CGTGGCGGCA
TACGGGGTGG TTAGTTATAC CGAAGCGTTT TTCTATTTGA TTTTTGAAGG TATTGCCCTC
GGCACCCAAC CCATTTATAG CTTTAATGCA GGAGCAGGGC GGTTTGATCG GGTAAAGCAA
GCACGTAATA TTGCCTTTAG CATGACCCTA CTCACCGCCG CGCTTGGCTT AGTGTTAATT
TACTCGCGCC CTGAGTGGTT GGTGTATTTG TTCGCTGGCG ATAATCCAAG TCTTACGCCG
GTTGCGATTG AAGGGATGCG TTGGTATTTT TGGGGCTTGC CGATGGAAGG CTTGATCTTA
GTTGGCGCGA GTTTCTTCCA AGCGATTAAT TGTTCAAAAC AGGCATCGAT TTTAACTGGC
GCAAAACTCA TACTGATTGC TGCAATTATC TATTGTTTTG CTTGGGCTTT TGGCGTGATT
GGCGTTTGGG TGTCGCTCGC GACCTGTAGC ACTATGCTGG TGATTTGGAT GTTTATCGCC
ATGCAGCGGC TTAAGGTTAA CGCCTAA
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| Protein sequence | MTAISHSATD QRLLQEPIAK LFWRYTIPTI ASMLVTGVYV TIDGIFVGHY LGETGLAGMM
LAYPVGAILY AIGAMIGMGS AALVSINLGQ GNVAKARKLL GNAFSLCLLA GAFFALVGGV
FSRDILIALG AEGEILENAN EYLFWYFALC HFPIISMAFT TLLRNDGRPS MVTFVLILGG
VLNTFLDWLF IVVFPFGLAG AAIATMLSQA VTGLLCLQHF FGARTQLKIN LEQMKLKLDN
CINIARVGLP SFLMNLYLSI VLTLHNTAFL WVGGPLHVAA YGVVSYTEAF FYLIFEGIAL
GTQPIYSFNA GAGRFDRVKQ ARNIAFSMTL LTAALGLVLI YSRPEWLVYL FAGDNPSLTP
VAIEGMRWYF WGLPMEGLIL VGASFFQAIN CSKQASILTG AKLILIAAII YCFAWAFGVI
GVWVSLATCS TMLVIWMFIA MQRLKVNA
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