Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1484 |
Symbol | aceA |
ID | 1169297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1551060 |
End bp | 1552382 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637343417 |
Product | isocitrate lyase |
Protein accession | NP_717101 |
Protein GI | 24373058 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAGG CAACACAGAC TTCACGTCAG GCGCAGATTG ACGCGATCAA AAAAGATTGG GCAGAGAATC CACGTTGGAA AAACGTCCGT CGTCCATACA CTGCAGAAGA AGTTGTGGCA CTTCGTGGTT CAATCGTACC CGAAAACACC ATTGCCAAGC GTGGTGCAGC TAAATTGTGG GATCTCGTTA ACGGTGGCTC GAAGAAAGGT TATGTGAACT CGTTAGGCGC GCTGACTGGC GGCCAAGCGG TACAGCAAGC TAAAGCGGGT ATTGAAGCCA TTTATCTGTC TGGTTGGCAA GTGGCGGCCG ACGCTAACTT AGCTGGCACC ATGTACCCAG ATCAATCCTT ATACCCAGCA AACTCAGTAC CTGCTGTCGT ATCACGTATT AATAACTCCT TCCGCCGCGC TGACCAAATC CAGTGGAGCA ACGGTGTCAA TCCTGAAGAT GAAAACTTTG TCGATTATTT CCTGCCGATT ATTGCCGATG CGGAAGCAGG TTTTGGTGGC GTACTGAATG CGTTCGAGTT AATGAAGTCG ATGATCGACG CAGGCGCCGC TGGTGTGCAC TTTGAGGACC AATTAGCCTC AGTGAAAAAG TGCGGTCATA TGGGCGGTAA AGTATTAGTA CCAACCCAAG AAGCGGTACA AAAATTGGTT GCAGCGCGCC TTGCTGCTGA CGTGAGCGGT GTTGAAACCT TAGTGATTGC CCGTACCGAT GCGAACGCGG CGGATCTGCT GACCTCTGAT TGCGACCCAT ATGACCGTGA TTTTGTCACT GGCGAGCGTA CCAACGAAGG TTTCTATCGC GTTAACGCAG GTCTCGACCA AGCAATTTCT CGCGGTCTCG CTTACGCCCC TTATGCAGAT TTAATTTGGT GTGAAACTGC TAAGCCAGAT TTAGAAGAAG CGCGCCGTTT TGCGGAAGCT ATCCATGCTC AGTACCCAGA TCAATTACTG GCCTATAACT GCTCACCTTC GTTCAACTGG AAGAAAAACC TGGACGACGC CACGATTGCA CGCTTCCAAC AAGCGCTGTC AGACATGGGC TACAAGTACC AGTTCATCAC TTTAGCGGGC ATCCATAACA TGTGGTACAA CATGTTTGAC CTGGCTTACG ATTATGCTCG TGGTGAAGGT ATGAAGCATT ATGTTGAGAA AGTTCAAGAA GTTGAGTTTG CGGCAGCGAA GAAAGGTTAC ACCTTCGTGG CGCATCAACA GGAAGTGGGC ACAGGTTATT TCGACCAAGT GACTACGGTT ATCCAAGGCG GCCATTCATC AGTGACTGCA CTGACGGGCT CTACCGAAGA AGAGCAGTTT TAA
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Protein sequence | MTKATQTSRQ AQIDAIKKDW AENPRWKNVR RPYTAEEVVA LRGSIVPENT IAKRGAAKLW DLVNGGSKKG YVNSLGALTG GQAVQQAKAG IEAIYLSGWQ VAADANLAGT MYPDQSLYPA NSVPAVVSRI NNSFRRADQI QWSNGVNPED ENFVDYFLPI IADAEAGFGG VLNAFELMKS MIDAGAAGVH FEDQLASVKK CGHMGGKVLV PTQEAVQKLV AARLAADVSG VETLVIARTD ANAADLLTSD CDPYDRDFVT GERTNEGFYR VNAGLDQAIS RGLAYAPYAD LIWCETAKPD LEEARRFAEA IHAQYPDQLL AYNCSPSFNW KKNLDDATIA RFQQALSDMG YKYQFITLAG IHNMWYNMFD LAYDYARGEG MKHYVEKVQE VEFAAAKKGY TFVAHQQEVG TGYFDQVTTV IQGGHSSVTA LTGSTEEEQF
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