Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1481 |
Symbol | |
ID | 1169294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1544160 |
End bp | 1545929 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637343414 |
Product | glutathione-regulated potassium-efflux system protein |
Protein accession | NP_717098 |
Protein GI | 24373055 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGAGT CGAGCCTGCT CACTTCTGTA CTGTTGTTTT TATTGGCCGC GGTAATTTTT GTGCCCTTGG GCAAACGTTT TGGCGCAGGA CCGATTCTGT CTTATCTCGC TGCTGGGGTG ATTTTAGGCC CAGGAGGTAT GGCATTGGTA TCCGATCCTG CGGCCGTGCT GCATTTTGCC GAGCTTGGCG TGGTACTCAT GTTGTTTGTA CTTGGGCTTG AGCTTAATCC GAGCAAACTG TGGGAACTGC GCAGCGCTAT CTTTGGTCTC GGTAGTGGTC AGTTACTCCT TTCTTGGGCG GCAATTGGTG GCTTAGCTTG GGGTTTTGGC TTATCTATTG AGGCGGCACT TGTTGTGGGG GCGGCATTAT CGCTGTCATC AACCGCTTTT GCAGTGCAGT TGATGAGTGA ACATCGACTG CTAACAACGC CTCTTGGCCG CGATGCCTTT GGGGTATTGT TGATGCAAGA TCTCGCGGTG ATCCCCATGT TGCTGTTAAC CGCTTACCTT GCGCCCAATT CGGCCCAGAT TGAACACCAT GCAGTGCCTT GGTATTGGAC CTGTGTGGCT TTAATCGGTT TTGTGTTGGT GGGCAAATAT CTGTTACCGC GGGTACTTAA ACTTGTCGCC AGCAGTGGCG TTCGTGAGGT GTTAACTGCC TTTGCGCTAT TGTTGGTGAT GGGCAGTGCC CAATTGATGG AGTGGCTGGG GTTGTCTGCG GGGATGGGCG CATTTTTAGC AGGGATTATG CTGGCGAACT CCAGCTACCG GCATCAGCTC GAAACCGATA TAGAGCCTTT TAAGGGCTTA CTGCTTGGGC TGTTTTTTAT GGCCGTGGGC ATGAGTATGG ATCTCAAACT GTTTTTGACC GATCCCTTAC TCATCCTTGC GATTTTGCTG GGTATGTTAC TGATTAAGAC CCTAGTGCTG ATGCTGCTTG GCCGAGTGCG CCACCATACA TGGCGCCCGA GTATTGCACT TGGGCTTATC TTGGCCGAGG GCGGTGAGTT TGCCTTTGTG CTGTTATCGC AGGCGCAATT ATCCAGCATA GTGGATGATA AGATTGCCCA AATCTTAGTG CTCGCCATTG GTTTATCCAT GGCGGTGACG CCGATGATTT TCACACTATT TAGAGCCACT AAGCCTAAGG TGGTGGATAC GCGCTTGCCC GACACCATCA ATGTCACTGA GTCTGAGGTA GTGATTGCCG GATTTGGTCG GGTAGGGCAG ATCACGGGAC GGATTTTAGC CTCCTCTGGT ATTCCATTTG TGGCGTTAGA TAAGGATGCC AGCCATGTGG ATGTGATCCG TCAATATGGT GGTGAGGTCT ATTTTGGCGA TGCTAGACGT TTAGATATGT TGATGTCGGC GGGGATTGCG CGCTCGCGGT TATTATTACT GGCTGTTGAT AGTGTTGAAG ATTCGATTGA AATTGCCCAG CAGGTAAAAA CCCATTTTCC CCATATTAAT ATCATTGCGC GGGCGCGGGA TCGTAACCAT GCTTACCGAT TAATGAGTCT TGGGGTGACT GATGTGTTCC GCGAAACCTT TGGTTCGGCC TTATCAGCCA GTGAGAAGAT ATTACAGGGC TTAGGTTTAT CCCAAGTGCA GGCCAATGAA CGGGTGAAGA TTTTTGCTGA GCACGATAAA AAGCTGGTGA TAGCCAGTGC CGCTCATCAA AATGATTTGG CAAAACTTAT TGATTTATCA AATAAAGGTA AAGCTGAGTT GGAGTCTTTG ATGCGTGGCG ACAGGGAGAA TGTGAGTTAA
|
Protein sequence | MEESSLLTSV LLFLLAAVIF VPLGKRFGAG PILSYLAAGV ILGPGGMALV SDPAAVLHFA ELGVVLMLFV LGLELNPSKL WELRSAIFGL GSGQLLLSWA AIGGLAWGFG LSIEAALVVG AALSLSSTAF AVQLMSEHRL LTTPLGRDAF GVLLMQDLAV IPMLLLTAYL APNSAQIEHH AVPWYWTCVA LIGFVLVGKY LLPRVLKLVA SSGVREVLTA FALLLVMGSA QLMEWLGLSA GMGAFLAGIM LANSSYRHQL ETDIEPFKGL LLGLFFMAVG MSMDLKLFLT DPLLILAILL GMLLIKTLVL MLLGRVRHHT WRPSIALGLI LAEGGEFAFV LLSQAQLSSI VDDKIAQILV LAIGLSMAVT PMIFTLFRAT KPKVVDTRLP DTINVTESEV VIAGFGRVGQ ITGRILASSG IPFVALDKDA SHVDVIRQYG GEVYFGDARR LDMLMSAGIA RSRLLLLAVD SVEDSIEIAQ QVKTHFPHIN IIARARDRNH AYRLMSLGVT DVFRETFGSA LSASEKILQG LGLSQVQANE RVKIFAEHDK KLVIASAAHQ NDLAKLIDLS NKGKAELESL MRGDRENVS
|
| |