Gene SO_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1390 
Symbol 
ID1169209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1447588 
End bp1448058 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content45% 
IMG OID637343332 
Productpeptidyl-prolyl cis-trans isomerase, FKBP-type 
Protein accessionNP_717010 
Protein GI24372968 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGT TACTTGCCGT TGTTGTGATT GCTGGGGTGA TTTTTTACTT CTTTACCACG 
ATGAACAACC AAAAAGCAGC GCAGGAAAAT ATCCGTTTAG GTAATGAATT TTTAGCGCAA 
AACAAAACCA AAGAAGGTGT GGTTACCACA GCTTCAGGTT TGCAATATCA AGTGTTAAAT 
CAAGGCTCTG GCACTATTCA TCCTAAGGCG AGCGATACCG TAACTGTGCA TTACCATGGC 
ACCTTGATCG ACGGCACCAT ATTCGATAGT TCCGTTGAAC GCGGTGACCC CATTGCCTTC 
CCGCTCAATC GGGTGATTAA AGGTTGGACC GAAGGGGTGC AATTGATGGT TGAAGGCGAC 
AAGTATCGCT TCTTTATTCC CAGCGATCTT GCCTACGGCA ATCGCAGCAC GGGTAAAATT 
GGCGGCGGCT CAGTGCTGAT TTTTGATGTG GAACTGTTGA AGATTAATTA A
 
Protein sequence
MKMLLAVVVI AGVIFYFFTT MNNQKAAQEN IRLGNEFLAQ NKTKEGVVTT ASGLQYQVLN 
QGSGTIHPKA SDTVTVHYHG TLIDGTIFDS SVERGDPIAF PLNRVIKGWT EGVQLMVEGD 
KYRFFIPSDL AYGNRSTGKI GGGSVLIFDV ELLKIN