Gene SO_1362 details

Gene Information

• Locus tag: SO_1362
• Symbol: tyrA
• ID: 1169183
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1416836
• End bp: 1417975
• Gene Length: 1140 bp
• Protein Length: 379 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637343306
• Product: bifunctional chorismate mutase/prephenate dehydrogenase
• Protein accession: NP_716982
• Protein GI: 24372940
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0287] Prephenate dehydrogenase; [COG1605] Chorismate mutase
• TIGRFAM ID: [TIGR01799] chorismate mutase domain of T-protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAAA AAACCACATC CGAATTAGAA CATCTTCGAG GACTGATCGA CGGTGTCGAT 
CAGCAATTGC TGCATTTACT GCGTAAACGC TTAGATTTAG TCGCCCAAGT CGGCACGGTA 
AAGCACGCTG CAGGATTACC CATTTATGCA CCACAGCGTG AAGCGGCAAT GCTGGCAAAA 
CGCCGTGAAG AAGCCCAAAC CATGGGCATT GCGCCACAAT TGATTGAAGA TATTTTACGT 
CGCCTAATGC GTGAATCCTA TCTTAATGAA AAGGATGTTG GCTTTAAGCA AGTCAAGAAT 
GATTTAGGTT CGGTAGTTAT AGTGGGCGGT AAAGGCCAGC TTGGCGGGCT GTTTCAACAA 
ATGCTGAGAC TGTCAGGTTA TCAAGTGAAA GTGCTCGATA AAGATGATTG GCAACAAGCG 
GAATGCTTAT TTGCCGATGC TGGATTGGTA TTAGTGACAG TGCCTATTGC CATCACCTGC 
GACATTATCC GTGAAAAGCT AACTCAGTTA CCACGGGACT GTATTCTAGC CGATTTAACC 
TCCATCAAGA CGGAACCCAT GCAGGCGATG TTGGCCGCTC ATAAGGGGCC TGTTGTCGGC 
TTTCATCCGA TGTTTGGTCC AGATGTCGGT AGCTTAGCTA AGCAGGTTGT GGTGGTGTGT 
CATGGGCGCG AAGCTGATAA ATACCAATGG TTACTCGAAC AAATTGCCAT TTGGGGCGCA 
CGGATTGTCG AAGCTGAGCC TGAATGTCAC GATAATGCGA TGCAACTGGT GCAGGCGATG 
CGCCATTTCT CAACCTTTGT CTATGGCTTA AATCTTTGCA AAGAAGAGGC GGATATAGAG 
ACTTTATTGA AATTTAGCTC GCCAATCTAC CGCTTAGAGT TAGCGATGGT GGGCCGTTTA 
TTTGCCCAAA GCCCGGAGCT TTACGCTGAT ATTATTTTTG CTCAGCAGGA GAGCCAGCAT 
GCGATTGGCG ATTATCTGGA TAACTATCGC GAAGCCTTAG AATTGCTGAA ACGGGGCGAT 
AGAGAGGAGT TTATCAATCA GTTCCAAATG GTTGCCAAGT GGTTTGGTGA TTTTGCACCG 
CAGTTTCAGC GCGAAAGTCG CATGATGCTG CAATCGGTAA GTGATATGAA AACGAACTGA 

 

Protein sequence

MNEKTTSELE HLRGLIDGVD QQLLHLLRKR LDLVAQVGTV KHAAGLPIYA PQREAAMLAK 
RREEAQTMGI APQLIEDILR RLMRESYLNE KDVGFKQVKN DLGSVVIVGG KGQLGGLFQQ 
MLRLSGYQVK VLDKDDWQQA ECLFADAGLV LVTVPIAITC DIIREKLTQL PRDCILADLT 
SIKTEPMQAM LAAHKGPVVG FHPMFGPDVG SLAKQVVVVC HGREADKYQW LLEQIAIWGA 
RIVEAEPECH DNAMQLVQAM RHFSTFVYGL NLCKEEADIE TLLKFSSPIY RLELAMVGRL 
FAQSPELYAD IIFAQQESQH AIGDYLDNYR EALELLKRGD REEFINQFQM VAKWFGDFAP 
QFQRESRMML QSVSDMKTN