| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1359 |
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| Symbol | trmD |
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| ID | 1169180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1414251 |
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| End bp | 1414997 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343303 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | NP_716979 |
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| Protein GI | 24372937 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGTTAG GGGTTATTAC CCTGTTCCCA GAAATGTTTC GTGCCGTAAC AGACTTTGGG
GTTACGGGTC GTGCCGTGAA AAACGGCCTG CTTGAGTTGC ACACGTGGAA TCCTCGCGAT
TTCACCCATG ATAGACACAG TACGGTGGAT GACAGGCCTT ACGGCGGTGG TCCAGGTATG
TTGATGATGG TGCAACCCTT ACGCGATGCC ATTCATGCAG CGAGAGCTGC AGCGGGTGAA
GATGCGAAGG TGATTTACTT GTCACCTCAA GGACGCAAGC TGGATCAGCA AGGCGTTACT
GAGTTGGCTA AATCATCACG GTTGATTTTG GTGTGTGGTC GGTACGAAGG TATTGATGAG
CGCATCATTC AAACGGAAGT GGATGAAGAA TGGTCGGTTG GGGATTACGT GCTCTCGGGC
GGCGAATTAC CCGCGATGAC CATGATAGAT GCAGTATCAA GGTTGGTTCC TGGCGTGCTA
GGAAAACAAG CTTCGGCGGA GCAAGATTCT TTCTCCGACG GTTTACTGGA CTGTCCTCAT
TACACGCGCC CCGAAAGCCT AGATGGACTC GATGTACCCG CAGTGCTGCT AAGTGGCAAC
CACGAACAAA TTAGACTCTG GCGTTTGCAG CAAAGCCTTG GTAGGACTTT ACTGAGACGA
CCAGAATTAT TGCAAAATCT AGCTCTGACT GACGAACAAT CGACTCTTTT AGCGCAGTTC
GTTGAAGCAA TGGACAAGAA TGCTTAG
|
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| Protein sequence | MWLGVITLFP EMFRAVTDFG VTGRAVKNGL LELHTWNPRD FTHDRHSTVD DRPYGGGPGM
LMMVQPLRDA IHAARAAAGE DAKVIYLSPQ GRKLDQQGVT ELAKSSRLIL VCGRYEGIDE
RIIQTEVDEE WSVGDYVLSG GELPAMTMID AVSRLVPGVL GKQASAEQDS FSDGLLDCPH
YTRPESLDGL DVPAVLLSGN HEQIRLWRLQ QSLGRTLLRR PELLQNLALT DEQSTLLAQF
VEAMDKNA
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