| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1351 |
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| Symbol | pdxJ |
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| ID | 1169172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1407463 |
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| End bp | 1408200 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343295 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | NP_716971 |
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| Protein GI | 24372929 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGTA TCTTATTGGG TGTAAATATC GATCATATTG CGACCCTACG TCAGGCTCGC
GGAACCAGTT ATCCTGATCC TGTCCACGCT GCGGCCGTTG CCGAACATGC AGGCGCTGAC
GGTATCACCA TTCATTTGCG GGAAGATAGA CGTCATATCA TTGACCGCGA TGTGTATTTG
TTGGCAAAAA CCTTAAAAAC GCGGATGAAC TTCGAGTGTG CAGTGACTGA AGAAATGCTC
AATATCGCCT GCGAAGTGAA ACCCACTTAC GTTTGCTTAG TGCCTGAAAA GCGCCAAGAA
GTGACCACAG AAGGCGGCTT AGATGTGGCT GGTCAATTAG ATAAAATCAC TGCCGCTGTT
AGCCGTTTAG CTGCCAATGG TATTCAAGTC TCACTGTTTA TCGATGCAGA TAAAACCCAA
ATCGATGCAG CGGTTGCTTC TGGTGCCCCT CTTATCGAAA TCCATACGGG TTGCTATGCC
GATGCCAAAA CGGCAGATGA AGAAGCTAAA GAGCTTGAGC GTATTCGTGA AATGGCAAAA
TATGCCCACG GCAAGGGACT GATTGTTAAC GCTGGTCATG GACTGCATTA TCACAATGTG
AAGCCGATTG CGGCTATCCC TGAGCTGTAT GAACTCAATA TTGGCCATGC CATTGTGGCC
CGCGCCGCGA TTGATGGCCT TGCAACAGCG GTGAAAGATA TGAAGACGCT GATGTTAGAA
GGTCGTCGGG GCGAATAA
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| Protein sequence | MSRILLGVNI DHIATLRQAR GTSYPDPVHA AAVAEHAGAD GITIHLREDR RHIIDRDVYL
LAKTLKTRMN FECAVTEEML NIACEVKPTY VCLVPEKRQE VTTEGGLDVA GQLDKITAAV
SRLAANGIQV SLFIDADKTQ IDAAVASGAP LIEIHTGCYA DAKTADEEAK ELERIREMAK
YAHGKGLIVN AGHGLHYHNV KPIAAIPELY ELNIGHAIVA RAAIDGLATA VKDMKTLMLE
GRRGE
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