Gene SO_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1348 
Symbolrnc 
ID1169169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1404926 
End bp1405606 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content46% 
IMG OID637343292 
Productribonuclease III 
Protein accessionNP_716968 
Protein GI24372926 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCGA TTAAAAATTT GCCTCGTCTG TGTCGTACGT TGGGGTATGA GTTCAAGAAT 
CTTGACCTTC TAACCCAAGC GTTGACCCAT AGAAGTGCGG CAAATAAGCA CAATGAACGT 
TTAGAGTTTT TAGGCGATTC AATTTTATCG ATTGTGATTT CAGACGCCTT ATATCATCAG 
TTTCCTAAGG CGACTGAGGG TGATTTGAGC CGGATGCGCG CCACCTTAGT ACGCGGTGAT 
ACGCTCACCT TGATTGCTCA AGCATTTAAG CTCGGGGATT ATTTATTTTT AGGCCCTGGC 
GAGTTAAAGA GTGGTGGTTT TAGGCGCGAG TCGATTCTGG CCGATGCGGT CGAGGCGATT 
ATCGGGGCAA TTTACTTAGA TTCCGACCTC GAAGTGTGCC GTCAGTTGTT GCTTAATTGG 
TACGCCGAGC GTTTGGCTGA GATCCAACCC GGTATTAATC AAAAAGACGC TAAAACCTTA 
CTGCAAGAAT ATTTACAAGG GTTAAAGAAG CCGCTACCCG ATTACCAAGT AATCAATATA 
GAAGGCGATG CCCACGATCA AACATTCACT GTTGAATGTC GTATAGATGA CTTGAGCCAA 
AGCGTGATAG GTGTAGCGAG TTCGCGCCGC AAAGCCGAGC AAATTGCCGC CGCTCAAGTA 
TTGGAGTTAC TGAAGAAATG A
 
Protein sequence
MEPIKNLPRL CRTLGYEFKN LDLLTQALTH RSAANKHNER LEFLGDSILS IVISDALYHQ 
FPKATEGDLS RMRATLVRGD TLTLIAQAFK LGDYLFLGPG ELKSGGFRRE SILADAVEAI 
IGAIYLDSDL EVCRQLLLNW YAERLAEIQP GINQKDAKTL LQEYLQGLKK PLPDYQVINI 
EGDAHDQTFT VECRIDDLSQ SVIGVASSRR KAEQIAAAQV LELLKK