Gene SO_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1329 
Symbol 
ID1169150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1386019 
End bp1387026 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content45% 
IMG OID637343273 
Productadenylate cyclase-related protein 
Protein accessionNP_716949 
Protein GI24372907 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCAT TCGTGTTTTT TCGATATGCC CAATCGCCAG AACTGCCGCA ATGGGCGGTA 
GGCTCTGCTG ATCTCGCGAC ACTGGCCATC TATATGGGCA TTATTTTTGG CAGCTTACAT
TGGATGTCCA ATCTGATTGC TGACTTTAGC GCCATCAATC GTCTTCCTTA TATATTCTCA
GTGATTTTTA AAGGTTTGTT CCTGTTGTTA GGGGCAACGA CCTTAGCCTA TATGACTCAA
TTCCTAAATA TGTGGGCTAT TGAAAATCAC ATGTCGACCC TAAGGCAAAT GCTTACGGCG
CATATCCTCT ATAGTCCCTC ATTCCAAGCG TTGATTGTTT ATTTAGTGGT CGTGCGAGTG
AGCTTAGCCT TTGTCGAACA GATGGGGCTG TTGGTTGGGC CACGTATTTT GCTCAATATT
GGTTTAGGCA AATACCATAA GCCAAGATAC GAACAGCGTT TATTCCTATA TTTAGATATG
GTTGCCTCGA CTACCCACGC CGAATCCCTC GGCGATTATC GTTTTAGCCG CTTGATCCAA
GACAGTTTTA GCTTACTGTC AGATACGGTG AGCAATAACG AAGCCGAGAT TTATCGTTAC
ATGGGCGATG CAGTGTTAAT CCACTGGCCC TTAGAGGAAG GTGTCGTGCA CGACCGCTGC
ATGAATATCT ATTTTGAATT TAGCCAGCAA TTAAATTGGC AAAGACGTTA TTTCGAAGAA
CACTATGGTT TTGTGCCTAA ATTTAAAGCG GCAGCCCACT GTGGACAAGT GGTTGCTGCG
GTTGTTGGTG TACAAAAACA AGAAATTAGC TTCTTTAGTG ATGTACTCAA TACCTTAGCT
AGACTCCAAG ATCAATGTAA CCCGATGGGG CAACGTATGC TGATCTCAGG CGCCTTAGCG
GGACGACTCG ATAACCCAGA CAGTGCATAT CGACTCACGA ATTTGGGCCC GATTAAATTA
AAAGGGAAAC AACACTCGAT TGAAGTGTTC GGTGTTTCCC CTTTATAA
 
Protein sequence
MAAFVFFRYA QSPELPQWAV GSADLATLAI YMGIIFGSLH WMSNLIADFS AINRLPYIFS 
VIFKGLFLLL GATTLAYMTQ FLNMWAIENH MSTLRQMLTA HILYSPSFQA LIVYLVVVRV
SLAFVEQMGL LVGPRILLNI GLGKYHKPRY EQRLFLYLDM VASTTHAESL GDYRFSRLIQ
DSFSLLSDTV SNNEAEIYRY MGDAVLIHWP LEEGVVHDRC MNIYFEFSQQ LNWQRRYFEE
HYGFVPKFKA AAHCGQVVAA VVGVQKQEIS FFSDVLNTLA RLQDQCNPMG QRMLISGALA
GRLDNPDSAY RLTNLGPIKL KGKQHSIEVF GVSPL