| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1326 |
|---|
| Symbol | |
|---|
| ID | 1169147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 1383382 |
|---|
| End bp | 1384311 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637343270 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_716946 |
|---|
| Protein GI | 24372904 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1242] Predicted Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTCG ATGCATACGT AAACACATTT GGTGCTGTTT GTAAGGCTAA ATATGGCGAG
CGATTACGCA AGCTGACTAT CGATGCCAAA TTCACTTGTC CTAACCGTGA TGGCACCTTA
GGACGGGGAG GATGTACTTT TTGCAATGTA GCTTCCTTTA GTTATCAGCA AAAGGAAACA
TTAAGCATCA GTGAGCAGCT ACAGCAGGGG AAAGCCCGTT ATAAAGAAGC AAAACCTAAA
CTCAATGCGG ATAAATTTAT CGCTTATTTT CAGGCGTATA CGAGTACGTA CGATGAATAT
CAAGTGCTGA TGTCCAAATA TGATGAAGCA GTCAAAGACA GTGAAATTGT GGGCCTGTGT
GTAGGAACTC GTCCCGATTG TGTGCCTGAC AACGTGCTGG ATTTATTAGC GAGTTATCAG
CACAAAGGAG TCGATGTATG GTTAGAGCTG GGCTTGCAGA CCGCCAACGA TAAGACACTT
CATCATATTA ACCGCGGGCA TAATTTTGCC TGTTACTGCG ATACTGTTTC GCGGGCGAGA
AGCCGCGGTT TAAAGGTGTG TACCCATTTG ATTCTAGGTT TACCAGGGGA AACACCGCTC
GATTATATGG CGACCTTGCA AGCGGTGCTC GCGCAGGGCG TGGATGGTTT AAAGCTACAT
CCTTTACATG TGGTTGAAGG TAGTACTATG GCTAAAGTTT GGCGCGCTGG ACGTTTGCCT
TTGCTCACTA TGGAAGCTTA TGCCGCCAGT GCTGGCGAGC TTATTCGCCA TACCCCTAAG
GAAATCATTT TCCACCGAGT CACCGCTTAT GCCAAAAAGC CTATTCTGCT TGCGCCTGAC
TGGTGCGGTT ATCGTTGGAA TGGCTTAGTG GCGATTGTGG AGGATCTTGC GCGTAATGGT
GGACAAGGGA CGGCATTAGC GCGACCATAA
|
|---|
| Protein sequence | MGLDAYVNTF GAVCKAKYGE RLRKLTIDAK FTCPNRDGTL GRGGCTFCNV ASFSYQQKET
LSISEQLQQG KARYKEAKPK LNADKFIAYF QAYTSTYDEY QVLMSKYDEA VKDSEIVGLC
VGTRPDCVPD NVLDLLASYQ HKGVDVWLEL GLQTANDKTL HHINRGHNFA CYCDTVSRAR
SRGLKVCTHL ILGLPGETPL DYMATLQAVL AQGVDGLKLH PLHVVEGSTM AKVWRAGRLP
LLTMEAYAAS AGELIRHTPK EIIFHRVTAY AKKPILLAPD WCGYRWNGLV AIVEDLARNG
GQGTALARP
|
|---|
| |