| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1322 |
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| Symbol | pfs |
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| ID | 1169143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1375956 |
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| End bp | 1376666 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343266 |
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| Product | 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase |
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| Protein accession | NP_716942 |
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| Protein GI | 24372900 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAG GTATTATTGG CGCAATGGAG CCAGAAGTTG CTCATCTTAT TGCGGCTATG
ACAAACACTT CATCACAAAC CATTGCAGAT ATTGAATTTA TCGCTGGCAC CTTAGCGGGC
AAAGACGTAG TGGTCACGCG CTCGGGCATT GGTAAAGTCG CTGCCAGTAT CGCCACAACC
CTATTGATTG AAAAATACGC CCCCGATGCC GTAATCAACA CAGGTTCCGC CGGCGGCTTT
GTCGACTCGC TCTCAATTGG TGATATCGTA ATTTCATCAG AAGTGCGTCA CCACGATGTC
GATGTCACCG CATTTGGTTA CGAAATTGGC CAAATGGCGC AGCAACCAGC GGCATTTATT
CCAGCGCCAT ACTTAGTGGA AGCCGCCAAT AAAGCCATTG CGCAATTAGG CGAAGTGAGA
GCCATTGAAG GATTGATCTG TACCGGTGAT AGCTTTATTT GCGACCCAGT ACGCACCAAA
ACCATGCTGG AACACTTCCC AACCATGGCG GCCTGTGAAA TGGAAGGTGC GGCGATTGCC
CAAGTATGTC ACCAGTTTGG CGTGCCTTTT GTGGTCATTC GCTCGCTCTC TGACAACGCC
AACAACGACT CCCCCGTCGA CTTTGACGCT TATATTGTAA AAGCAGGCTA TCATTCAGCA
CTGATGGTGA TGTTGCTGCT TGAGCAATTG GAACCCAACT CTGTAAAGTA A
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| Protein sequence | MKIGIIGAME PEVAHLIAAM TNTSSQTIAD IEFIAGTLAG KDVVVTRSGI GKVAASIATT
LLIEKYAPDA VINTGSAGGF VDSLSIGDIV ISSEVRHHDV DVTAFGYEIG QMAQQPAAFI
PAPYLVEAAN KAIAQLGEVR AIEGLICTGD SFICDPVRTK TMLEHFPTMA ACEMEGAAIA
QVCHQFGVPF VVIRSLSDNA NNDSPVDFDA YIVKAGYHSA LMVMLLLEQL EPNSVK
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