Gene SO_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1290 
Symbol 
ID1169109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1341340 
End bp1341951 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content47% 
IMG OID637343234 
Productputative glycerol-3-phosphate acyltransferase PlsY 
Protein accessionNP_716912 
Protein GI24372870 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCAAT TATCACTGAC ACTTTTGATG ATTGTGGCCG CTTATTTAGC CGGTTCTGTC 
TCAAGTGCTG TGCTAGTGTG TAGGATGAGA GGCCTGCCCG ATCCAAGATC TCAAGGCTCT 
GGCAACCCAG GGGCAACAAA TGTGCTGCGC ATTGGCGGCG CAAGCTCGGC TGCCATGGTG 
TTGTTTTTCG ATATGCTCAA AGGCGCCCTG CCAACTTATC TTGCCTATTT GATGGGTATC 
GACGCCATCT CTTTAGGCTT GATTGCAATA GCCGCTTGTC TTGGCCATAT TTATCCCGTC 
TTTTTTGGTT TTAAAGGTGG CAAAGGCGTT GCAACTGCAT TTGGCGCAAT GGCGCCTATT 
GGAGATGACT TAGCAATTTG TTTAATGGCA TCTTGGGTTG TATTAGTCTT GATTAGTCGC 
TACTCCTCAC TTGCAGCCAT TATTACCGCA CTGCTTGCAC CACTTTATAC TTGGTGGCTA 
GACGATAGAT TTACCATTCC AGTCGCGATG CTCTCGACAC TAATTATCAT TCGCCATAAA 
GATAATATTA AGCGACTTCT CAAAGGGGAA GAATCTAAGG TGTCTCGTAA AAGGCGCCCA 
AAAATCCCCT AG
 
Protein sequence
MSQLSLTLLM IVAAYLAGSV SSAVLVCRMR GLPDPRSQGS GNPGATNVLR IGGASSAAMV 
LFFDMLKGAL PTYLAYLMGI DAISLGLIAI AACLGHIYPV FFGFKGGKGV ATAFGAMAPI 
GDDLAICLMA SWVVLVLISR YSSLAAIITA LLAPLYTWWL DDRFTIPVAM LSTLIIIRHK 
DNIKRLLKGE ESKVSRKRRP KIP