| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1289 |
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| Symbol | gcp |
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| ID | 1169108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1340245 |
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| End bp | 1341261 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343233 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | NP_716911 |
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| Protein GI | 24372869 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGTTC TAGGTATTGA GACATCCTGT GACGAGACAG GTATTGCCGT TTATGACGAT
AAGCTGGGGT TACTTTCCCA TGCTTTATAT AGTCAGGTTA AGTTACATGC AGATTATGGT
GGTGTGGTGC CTGAACTCGC CTCCCGCGAC CATGTGCGCA AAATTGTCCC CTTGATCCGC
CAAGCGTTGA AAAACGCCAA TACTGATATT GCTGACATCG ATGGTATCGC TTACACCAAA
GGCCCAGGAT TAATTGGGGC TTTATTAGTG GGCGCTTGTG TTGGTCGCTC GCTTGCCTTT
GCATGGAACA AACCTGCCAT CGGCGTGCAC CATATGGAAG GGCATTTGCT TGCGCCTATG
CTGGAAGAGG ATGCACCAGA GTTTCCTTTT GTTGCACTGT TAGTGTCAGG CGGTCATTCC
ATGTTGGTCA AGGTTGATGG CATTGGCCTT TATGCAGTCT TAGGTGAATC AGTTGATGAT
GCTGCCGGTG AAGCCTTTGA TAAAACGGCC AAGTTAATGG GGCTTGATTA TCCAGGTGGA
CCACGTTTAG CCAAACTTGC GGCAAAAGGT GAACCTGCAG GTTATCAATT TCCGCGCCCA
ATGACCGACA GACCAGGGCT TGATTTCAGC TTCTCAGGCC TTAAAACTTT CACCGCTAAT
ACCATTGCGG CTGAACCTGA TGATGAACAA ACCCGTGCCA ATATCGCCAG AGCTTTTGAA
GAAGCGGTAG TTGATACTTT AGCGATAAAA TGTCGCCGCG CGTTAAAACA AACGGGCTAT
AACCGTTTAG TGATTGCTGG GGGGGTGAGT GCTAATACCC GCTTACGGGA AACCTTGGCT
GAGATGATGA CCTCCATTGG TGGCCGGGTT TATTATCCTC GCGGCGAGTT TTGTACTGAC
AATGGCGCCA TGATTGCCTT TGCCGGATTG CAACGCTTAA AAGCAGGGCA GCAGGAAGAC
TTAGCAGTAA AAGGTCAACC AAGATGGCCG CTTGATACCT TACCGCCCTT GGCTTGA
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| Protein sequence | MRVLGIETSC DETGIAVYDD KLGLLSHALY SQVKLHADYG GVVPELASRD HVRKIVPLIR
QALKNANTDI ADIDGIAYTK GPGLIGALLV GACVGRSLAF AWNKPAIGVH HMEGHLLAPM
LEEDAPEFPF VALLVSGGHS MLVKVDGIGL YAVLGESVDD AAGEAFDKTA KLMGLDYPGG
PRLAKLAAKG EPAGYQFPRP MTDRPGLDFS FSGLKTFTAN TIAAEPDDEQ TRANIARAFE
EAVVDTLAIK CRRALKQTGY NRLVIAGGVS ANTRLRETLA EMMTSIGGRV YYPRGEFCTD
NGAMIAFAGL QRLKAGQQED LAVKGQPRWP LDTLPPLA
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