| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1270 |
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| Symbol | |
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| ID | 1169090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1318405 |
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| End bp | 1319508 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637343215 |
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| Product | polyamine ABC transporter, periplasmic polyamine-binding protein |
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| Protein accession | NP_716893 |
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| Protein GI | 24372851 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTAT TTAATAAGAT GACGACTTTG GCTTTAGTTA CCGCAGGAAC ACTTGCCAGC
GTTGCTGTTC AGGCTGAAGA AGTCGTGCGT ATGTATAACT GGTCTGATTA TATCGCTGAA
GACACCTTAG AAAACTTCAA GAAAGAAACT GGGATCCGGG TGATTTATGA TGTATTTGAC
AGCAACGAAG TAGTCGAAGC TAAGTTATTA TCTGGTCGCA GCGGCTATGA CATCGTCGTC
CCATCCAACC ATTTCCTCGC TAAACAGATT AAGGCGGGTG CATTCAAGCC ACTAGACCGC
TCTAAACTCA CCAATTTTAA AAACCTCAAT GCTGATCTGA TGAAGCTGTT AGAAAAGGCC
GATCCAGGGA ACCAATATGC TGTACCTTAC CTTTGGGGAA CTAACGGTAT TGGTTATAAC
ATTAACAAAG TGAAAGCGGC TGTGGGTGAA GATGCGCCAC CATTCAACTC TATGGAGCTG
ATCTTTAACC CCAAATACGC TGAGAAAATA TCGAAGTGTG GCTTTGCGAT GTTAGATTCG
GCCGATGACA TGGTGCCACA GGCGATGATT TATCTTGGGC TCGATCCTAA CAGTACTAAG
GCCGAAGATT ACGAAAAAGC CGGTGAGTTA CTCGAAAAGA TTCGTCCCTA TGTGACGTAT
TTCCATTCAT CACGTTATAT CTCTGATCTC GCCAATGGTG ATATTTGTGT TGCTTATGGT
TTCTCTGGTG ACGTGTTCCA AGCTGCTGCC CGCGCCGATG AAGCGGGTAA TGGCAACAAG
ATTGGTTACT CGATCCCTAA AGAAGGCGCC AACCTGTGGT TCGATATGTT AGCCATCCCA
GCAGACGCCA CTAACGTGGA AAATGCTCAT AAGCTTATCA ACTACTTATT ACGTCCAGAA
GTGATAGCAC CTATCTCTAA CTATGTGGCT TATGCCAATC CTAATGATTT AGCACAACCA
TTAGTTGATG AAGCGATTCG CAATGACCCA GCGATTTATC CACCAAAAGA AGTGTTGGAT
AAATTGTACA TTGGCGAGAT TCGTCCATTG AAAATCCAAC GTGTATTAAC TCGTGTCTGG
ACCAAAGTGA AGTCAGGCCA ATAA
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| Protein sequence | MKLFNKMTTL ALVTAGTLAS VAVQAEEVVR MYNWSDYIAE DTLENFKKET GIRVIYDVFD
SNEVVEAKLL SGRSGYDIVV PSNHFLAKQI KAGAFKPLDR SKLTNFKNLN ADLMKLLEKA
DPGNQYAVPY LWGTNGIGYN INKVKAAVGE DAPPFNSMEL IFNPKYAEKI SKCGFAMLDS
ADDMVPQAMI YLGLDPNSTK AEDYEKAGEL LEKIRPYVTY FHSSRYISDL ANGDICVAYG
FSGDVFQAAA RADEAGNGNK IGYSIPKEGA NLWFDMLAIP ADATNVENAH KLINYLLRPE
VIAPISNYVA YANPNDLAQP LVDEAIRNDP AIYPPKEVLD KLYIGEIRPL KIQRVLTRVW
TKVKSGQ
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