Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1264 |
Symbol | |
ID | 1169085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1311888 |
End bp | 1313195 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343210 |
Product | oxidoreductase |
Protein accession | NP_716887 |
Protein GI | 24372845 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCACAA AACCTCCTGT ACACAGTGAG CAATATCCTC ACTCTTATTA TCTTGATACT GCTAAAGAAA TTTATGCTCA CCCTCAACTT GAAGGCAGCA TAACGGCAGA TGTTTGTATT GTGGGCGGTG GATTTAGTGG CATCAATACT GCGATAGAAC TAAGACAACG CGGCTTAAGT GTCGTACTTC TAGAAGCTAA ACGAATGGGC TGGGGCGCGT CGGGCCGCAA TGGCGGCGAG CTAATCCGCG GTATTGGCCA TGATCCCGCA CAATTCATAA ACGAAATTGG CCAAGAAGGC GTAAGTGCCA TTCAGCAAAT GGGCTTTGAA GCGGTAGACA TAGTCCGAAA CCGCATCCAA ACCCACCAAA TTGATTGCGA TTTGCAAATG GGCTATTGCG ATCTGGCGGT AAAACCTCGC CACATGATTG AATTGCAAGA GGAATTTGAA AGCCTTAAAA GCCTTGGATA TAAGCATGAA ATCAAACTGT TAGCTCAATC TCAACTCGGT AATGTCATAG GCTCTGATTT TTACCAAGGC GCCCTAGTCG ATATGGGAAG TGGCCATTTA CATCCGCTTA ATTTGGCGTT GGGAGAAGCT CGTGTCGCCC GTGAGCTTGG GGCACAATTA TTTGAATACA GTGCTGCCGA AAAGATTATT CAAGGTGATA AACCTAAAGT TTTGACAGCC AAAGGAGAAG TGACTTGCCA ATATTTAGTA TTGGCGGGCA ACGCTTATAT CGGCCATAAA CTCAATAGTT ACATTGGTGG CAAAGTATTA CCTGCGGGTA GCTACCTGCT TGCAACAGAG CCACTAACGC AACAACAATG TAAGAACATT ATTCCGCAAA ATATGGCCTT TGCCGATATG CGAATTGCTT TAGATTACTT CCACTTATCG GCAGATAGAC GTTTACTTTT TGGTGGACTT TGTACCTATT CAGGCAAAGA TCCCAAGGAT ATCGAGGCAG CCCTAAGACC TAATCTTGAA AAGGTATTCC CGCAGTTAAA AGGCGTACGT ATCGACTATG AGTGGGGCGG TATGATAGGG ATTGGCGCTA ATCGTATGCC ACAAATTGGC CGTCTACCTG ATGCGAGTAA TATTTTTTTC GCCCAAGCCT ATGCAGGCCA CGGAGTCAAT GCGACTCATA TGGCAGCAAA ACTCTTAGCC GAAGCGATTT GTCAGCAAGC AGGGCATTTC GATGTATTCG CTAAGATTAA GCATATGACG TTCCCTGGCG GTCCGACATT CCGCTCCCCA ATGCTAGCTG CGGGGATGCT GTACCATAGA TTTAAGGATT TATTCTAA
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Protein sequence | MPTKPPVHSE QYPHSYYLDT AKEIYAHPQL EGSITADVCI VGGGFSGINT AIELRQRGLS VVLLEAKRMG WGASGRNGGE LIRGIGHDPA QFINEIGQEG VSAIQQMGFE AVDIVRNRIQ THQIDCDLQM GYCDLAVKPR HMIELQEEFE SLKSLGYKHE IKLLAQSQLG NVIGSDFYQG ALVDMGSGHL HPLNLALGEA RVARELGAQL FEYSAAEKII QGDKPKVLTA KGEVTCQYLV LAGNAYIGHK LNSYIGGKVL PAGSYLLATE PLTQQQCKNI IPQNMAFADM RIALDYFHLS ADRRLLFGGL CTYSGKDPKD IEAALRPNLE KVFPQLKGVR IDYEWGGMIG IGANRMPQIG RLPDASNIFF AQAYAGHGVN ATHMAAKLLA EAICQQAGHF DVFAKIKHMT FPGGPTFRSP MLAAGMLYHR FKDLF
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