Gene SO_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1264 
Symbol 
ID1169085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1311888 
End bp1313195 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content46% 
IMG OID637343210 
Productoxidoreductase 
Protein accessionNP_716887 
Protein GI24372845 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACAA AACCTCCTGT ACACAGTGAG CAATATCCTC ACTCTTATTA TCTTGATACT 
GCTAAAGAAA TTTATGCTCA CCCTCAACTT GAAGGCAGCA TAACGGCAGA TGTTTGTATT
GTGGGCGGTG GATTTAGTGG CATCAATACT GCGATAGAAC TAAGACAACG CGGCTTAAGT
GTCGTACTTC TAGAAGCTAA ACGAATGGGC TGGGGCGCGT CGGGCCGCAA TGGCGGCGAG
CTAATCCGCG GTATTGGCCA TGATCCCGCA CAATTCATAA ACGAAATTGG CCAAGAAGGC
GTAAGTGCCA TTCAGCAAAT GGGCTTTGAA GCGGTAGACA TAGTCCGAAA CCGCATCCAA
ACCCACCAAA TTGATTGCGA TTTGCAAATG GGCTATTGCG ATCTGGCGGT AAAACCTCGC
CACATGATTG AATTGCAAGA GGAATTTGAA AGCCTTAAAA GCCTTGGATA TAAGCATGAA
ATCAAACTGT TAGCTCAATC TCAACTCGGT AATGTCATAG GCTCTGATTT TTACCAAGGC
GCCCTAGTCG ATATGGGAAG TGGCCATTTA CATCCGCTTA ATTTGGCGTT GGGAGAAGCT
CGTGTCGCCC GTGAGCTTGG GGCACAATTA TTTGAATACA GTGCTGCCGA AAAGATTATT
CAAGGTGATA AACCTAAAGT TTTGACAGCC AAAGGAGAAG TGACTTGCCA ATATTTAGTA
TTGGCGGGCA ACGCTTATAT CGGCCATAAA CTCAATAGTT ACATTGGTGG CAAAGTATTA
CCTGCGGGTA GCTACCTGCT TGCAACAGAG CCACTAACGC AACAACAATG TAAGAACATT
ATTCCGCAAA ATATGGCCTT TGCCGATATG CGAATTGCTT TAGATTACTT CCACTTATCG
GCAGATAGAC GTTTACTTTT TGGTGGACTT TGTACCTATT CAGGCAAAGA TCCCAAGGAT
ATCGAGGCAG CCCTAAGACC TAATCTTGAA AAGGTATTCC CGCAGTTAAA AGGCGTACGT
ATCGACTATG AGTGGGGCGG TATGATAGGG ATTGGCGCTA ATCGTATGCC ACAAATTGGC
CGTCTACCTG ATGCGAGTAA TATTTTTTTC GCCCAAGCCT ATGCAGGCCA CGGAGTCAAT
GCGACTCATA TGGCAGCAAA ACTCTTAGCC GAAGCGATTT GTCAGCAAGC AGGGCATTTC
GATGTATTCG CTAAGATTAA GCATATGACG TTCCCTGGCG GTCCGACATT CCGCTCCCCA
ATGCTAGCTG CGGGGATGCT GTACCATAGA TTTAAGGATT TATTCTAA
 
Protein sequence
MPTKPPVHSE QYPHSYYLDT AKEIYAHPQL EGSITADVCI VGGGFSGINT AIELRQRGLS 
VVLLEAKRMG WGASGRNGGE LIRGIGHDPA QFINEIGQEG VSAIQQMGFE AVDIVRNRIQ
THQIDCDLQM GYCDLAVKPR HMIELQEEFE SLKSLGYKHE IKLLAQSQLG NVIGSDFYQG
ALVDMGSGHL HPLNLALGEA RVARELGAQL FEYSAAEKII QGDKPKVLTA KGEVTCQYLV
LAGNAYIGHK LNSYIGGKVL PAGSYLLATE PLTQQQCKNI IPQNMAFADM RIALDYFHLS
ADRRLLFGGL CTYSGKDPKD IEAALRPNLE KVFPQLKGVR IDYEWGGMIG IGANRMPQIG
RLPDASNIFF AQAYAGHGVN ATHMAAKLLA EAICQQAGHF DVFAKIKHMT FPGGPTFRSP
MLAAGMLYHR FKDLF