Gene SO_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1215 
Symbol 
ID1169043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1262531 
End bp1263382 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content41% 
IMG OID637343168 
Productouter membrane protein OmpK, putative 
Protein accessionNP_716838 
Protein GI24372796 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3248] Nucleoside-binding outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG TTAAAACTTT AGCTTTAGCT GCTACTGCTG TAGCTGCAAT CTCTGGTAAC 
GCATTTGCTG CTGATCGTTC TGACCTACGT GCAGGCGATC ACAGCTGGAT GCAGTTCAAC
GCTATGTATG CAGTAAACGA ACTGCCTCGT GATGGCTCTA CTGATAACGG TCACGATTAC
CTAGAGATGG AATTTGGTGG ACGTGCTGGT GTTGTTGATC TATACGGTTA TGTTGATGTG
TTCAACGTAA CTAACCGTGA TTACGGTGAC AAAGCTGCTG GTAGTGGTAA AAGCAAATTA
TTCATGAAAT TTGCTCCACG TTTCTCACTT GATGCTATCA CTGGCATGGA TCTTTCTGTT
GGTCCTATTC AAGAAGTTTA TTTTTCAACT TTATTTAACT GGGATGACAG AATTGGTGAG
GGTGTAAACT CTACATTCTG GGGTCTAGGT GCTGACGTTA TGGTTCCATG GCTAGGCAAA
ACTGGCATGA ATTTATACGC TTACTATGAT CTGAACGGTA AAGATTGGAA CGGCTACCAA
TTTTCTATGA ACTGGTTCAA ACCAGTTGTT AACTTCGATA ATGGCAGTTT TATTGCTTTC
CAAGGCTATG TTGATTATCA GTTCGGTGCT GATGAAGTTA ATGCTTATGA TGCCAATGGT
CAGTACGTAA ACACTACATT TACTTCTAAT GGTGGTGCTG CATACTTCGG TCTGCACTGG
CATTCAGATA ACTATGCGCT TGGTTATGGC CTGAAAGCCT ATAACGATGT TTATTTGCTG
AAGGATGAAG GAACATTTGG TTTAGAAACT AAAGGTTTCG CTCACTACTT CACTGCAACT
TACAAGTTCT AA
 
Protein sequence
MKNVKTLALA ATAVAAISGN AFAADRSDLR AGDHSWMQFN AMYAVNELPR DGSTDNGHDY 
LEMEFGGRAG VVDLYGYVDV FNVTNRDYGD KAAGSGKSKL FMKFAPRFSL DAITGMDLSV
GPIQEVYFST LFNWDDRIGE GVNSTFWGLG ADVMVPWLGK TGMNLYAYYD LNGKDWNGYQ
FSMNWFKPVV NFDNGSFIAF QGYVDYQFGA DEVNAYDANG QYVNTTFTSN GGAAYFGLHW
HSDNYALGYG LKAYNDVYLL KDEGTFGLET KGFAHYFTAT YKF