Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1215 |
Symbol | |
ID | 1169043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1262531 |
End bp | 1263382 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637343168 |
Product | outer membrane protein OmpK, putative |
Protein accession | NP_716838 |
Protein GI | 24372796 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3248] Nucleoside-binding outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACG TTAAAACTTT AGCTTTAGCT GCTACTGCTG TAGCTGCAAT CTCTGGTAAC GCATTTGCTG CTGATCGTTC TGACCTACGT GCAGGCGATC ACAGCTGGAT GCAGTTCAAC GCTATGTATG CAGTAAACGA ACTGCCTCGT GATGGCTCTA CTGATAACGG TCACGATTAC CTAGAGATGG AATTTGGTGG ACGTGCTGGT GTTGTTGATC TATACGGTTA TGTTGATGTG TTCAACGTAA CTAACCGTGA TTACGGTGAC AAAGCTGCTG GTAGTGGTAA AAGCAAATTA TTCATGAAAT TTGCTCCACG TTTCTCACTT GATGCTATCA CTGGCATGGA TCTTTCTGTT GGTCCTATTC AAGAAGTTTA TTTTTCAACT TTATTTAACT GGGATGACAG AATTGGTGAG GGTGTAAACT CTACATTCTG GGGTCTAGGT GCTGACGTTA TGGTTCCATG GCTAGGCAAA ACTGGCATGA ATTTATACGC TTACTATGAT CTGAACGGTA AAGATTGGAA CGGCTACCAA TTTTCTATGA ACTGGTTCAA ACCAGTTGTT AACTTCGATA ATGGCAGTTT TATTGCTTTC CAAGGCTATG TTGATTATCA GTTCGGTGCT GATGAAGTTA ATGCTTATGA TGCCAATGGT CAGTACGTAA ACACTACATT TACTTCTAAT GGTGGTGCTG CATACTTCGG TCTGCACTGG CATTCAGATA ACTATGCGCT TGGTTATGGC CTGAAAGCCT ATAACGATGT TTATTTGCTG AAGGATGAAG GAACATTTGG TTTAGAAACT AAAGGTTTCG CTCACTACTT CACTGCAACT TACAAGTTCT AA
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Protein sequence | MKNVKTLALA ATAVAAISGN AFAADRSDLR AGDHSWMQFN AMYAVNELPR DGSTDNGHDY LEMEFGGRAG VVDLYGYVDV FNVTNRDYGD KAAGSGKSKL FMKFAPRFSL DAITGMDLSV GPIQEVYFST LFNWDDRIGE GVNSTFWGLG ADVMVPWLGK TGMNLYAYYD LNGKDWNGYQ FSMNWFKPVV NFDNGSFIAF QGYVDYQFGA DEVNAYDANG QYVNTTFTSN GGAAYFGLHW HSDNYALGYG LKAYNDVYLL KDEGTFGLET KGFAHYFTAT YKF
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