Gene SO_1197 details

Gene Information

• Locus tag: SO_1197
• Symbol: ftsH
• ID: 1169025
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1239865
• End bp: 1241814
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637343150
• Product: cell division protein FtsH
• Protein accession: NP_716822
• Protein GI: 24372780
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA ATTTAATACT CTGGGTTGTC ATCGCCGTTG TGCTGATGTC AGTGTTTCAG 
GGTTACTCCC CCTCTTCTTC GTCATCGCAG AAGATGGATT ATTCTACTTT CCTAGACAAT 
GTTCGTGATG GACAAGTCGC TACCGTTGAA GTGAAAAGTG ACCAACGTAC TATCGAAGGT 
TCCAAGCGTA CGGGCGAAAA ATTCACGACC ATCATGCCAC TGTATGATCA AGATTTGATT 
AATGATCTTG ACCGTAAAGG CATCACCATG AAAGGCCAAG AGGCCGAAGA ATCAGGGTTC 
TTAACCCAGA TCTTCATCTC TTGGTTCCCA ATGTTGCTGC TGATTGGTGT GTGGATTTTC 
TTTATGCGCC AAATGCAAGG CGGCGGTGGC AAAGGCGCAA TGTCCTTTGG CAAGAGCAAA 
GCCAAGTTGA TGAGCGAAGA TCAAATCAAA ACCACTTTTG CTGACGTTGC TGGTTGTGAT 
GAAGCGAAAG AGGAAGTGAA AGAACTTGTT GATTATCTGC GCGATCCAAC CAAATTCCAA 
AAGTTGGGTG GCCGTATTCC AACGGGCGTG CTCATGGTAG GTCCTCCAGG TACAGGTAAA 
ACCTTACTGG CGAAAGCGAT TGCGGGTGAG TCAAAAGTGC CTTTCTTTAC GATTTCAGGT 
TCTGACTTCG TGGAAATGTT CGTCGGTGTC GGCGCATCTC GCGTGCGTGA CATGTTCGAA 
CAGGCGAAAA AATCTGCGCC TTGTATCATC TTTATCGACG AAATCGATGC TGTGGGTCGC 
CAACGTGGTG CGGGTTTAGG TGGTGGTCAC GACGAGCGTG AGCAAACCCT TAACCAAATG 
CTGGTTGAGA TGGATGGCTT CGAAGGTAAC GAAGGTATCA TCGTTATTGC AGCGACAAAC 
CGTCCTGACG TACTTGATTC TGCTCTGCTG CGTCCAGGCC GTTTTGACCG TCAAGTGGTT 
GTTGGCCTGC CAGACGTTCG CGGTCGCGAG CAAATCCTTA AAGTGCATAT GCGTAAAGTG 
CCGCTTTCTG AAGATGTCAA AGCAAGCGTG ATTGCCCGTG GTACACCAGG TTTCTCAGGT 
GCAGATTTAG CCAACTTAGT TAATGAAGCG GCCTTGTTTG CTGCGCGCGG TAACCGTCGT 
GTTGTTGGCA TGGAAGAGTT TGAGCGCGCA AAAGACAAGA TCATGATGGG TGCTGAGCGC 
CGTTCTATGG TGATGTCTGA AGCGGAAAAA GAGATGACCG CATACCACGA AGCAGGTCAT 
GCGATTGTGG GCTGTTTAGT GCCTGAGCAC GATCCTGTTC ACAAGGTAAC GATTATCCCA 
CGTGGTCGTG CCTTAGGTGT GACTTTCTTC TTGCCCGAGG CGGATGCGAT CAGCCAAAGC 
CGTCGTAAGT TAGAAAGCCA AATTTCAGTT GCCTACGGTG GTCGTTTAGC CGAAGAGCTG 
ATCTACGGCA CTGAAAAAGT CTCTACTGGT GCTTCGCAGG ACATCAAGTA TGCCACTTCG 
ATTGCGCGTA ATATGGTGAC CCAATGGGGC TTCTCCGACA AATTAGGCCC ATTACTTTAC 
GCTGAAGAAG AAGGTGAAGT CTTCTTAGGT CGTAGCATGG GTAAAGCTAA GGCGATGTCC 
GATGAAACCG CTACGCTTAT CGATACTGAA GTGAAGGCGT TTATCGACAA AAACTACAGT 
CGTGCTAAGC AAATCCTTCA AGATAACGTC GATATTTTGC ATTCGATGAA AGACGCGTTA 
ATGAAGTATG AAACCATCGA CTCACTGCAG ATTGACGATC TAATGAATCG CCGTGAAGTA 
CGTCAGCCTG CCGATTGGCA AGCCGATGAA AACGGTTCAA ATGATAAAGG CAATGGTAAA 
GGTGAGCCAG CTGTTAAAGT TGATGAAGTC GTCAAATCTG CTCCTGCAGA GGCTGAGCTT 
AAAGATGCCG ACGAGTCACC CGTTAAGTAA 

 

Protein sequence

MAKNLILWVV IAVVLMSVFQ GYSPSSSSSQ KMDYSTFLDN VRDGQVATVE VKSDQRTIEG 
SKRTGEKFTT IMPLYDQDLI NDLDRKGITM KGQEAEESGF LTQIFISWFP MLLLIGVWIF 
FMRQMQGGGG KGAMSFGKSK AKLMSEDQIK TTFADVAGCD EAKEEVKELV DYLRDPTKFQ 
KLGGRIPTGV LMVGPPGTGK TLLAKAIAGE SKVPFFTISG SDFVEMFVGV GASRVRDMFE 
QAKKSAPCII FIDEIDAVGR QRGAGLGGGH DEREQTLNQM LVEMDGFEGN EGIIVIAATN 
RPDVLDSALL RPGRFDRQVV VGLPDVRGRE QILKVHMRKV PLSEDVKASV IARGTPGFSG 
ADLANLVNEA ALFAARGNRR VVGMEEFERA KDKIMMGAER RSMVMSEAEK EMTAYHEAGH 
AIVGCLVPEH DPVHKVTIIP RGRALGVTFF LPEADAISQS RRKLESQISV AYGGRLAEEL 
IYGTEKVSTG ASQDIKYATS IARNMVTQWG FSDKLGPLLY AEEEGEVFLG RSMGKAKAMS 
DETATLIDTE VKAFIDKNYS RAKQILQDNV DILHSMKDAL MKYETIDSLQ IDDLMNRREV 
RQPADWQADE NGSNDKGNGK GEPAVKVDEV VKSAPAEAEL KDADESPVK