| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1194 |
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| Symbol | secF |
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| ID | 1169022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1237851 |
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| End bp | 1238735 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637343147 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | NP_716819 |
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| Protein GI | 24372777 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAATA TTAATCTGAC TAAATGGCGC TATATTTCGA GCGCTATCTC GATCTTTTTA
ATGCTTGCAT CGTTAACTAT TGTCTGCGTG AAGGGTTTTA ACTGGGGCTT AGATTTTACG
GGAGGGGTGG TTACCGAAGT ACAACTTGAT AGAAAAATCA CCAGTAGTGA ATTGCAGCCA
TTATTGAATG CTGCCTATCA GCAAGACGTC AGCGTGATTT CGGCTAGTGA GCCGGGGCGA
TGGGTATTGC GTTACGCAGA TACGGCCCAA AGTCATGTTG ATATTGCGCA AACCTTAGCG
CCACTTGGCG AAGTACAAGT GTTAAATACC AGCGTTGTCG GTCCGCAGGT GGGTAAAGAA
CTGGCAGAGC AGGGCGGTCT TGCACTGTTA GTTGCTATGT TAGCGATCTT AGGTTATTTG
AGTTACCGTT TTGAATGGCG TCTCGCTTCT GGTGCATTAT TTGCGCTGGT ACACGACGTG
ATGTTTGTGC TTGCCTTTTT CTCGCTGACA CAGATGGAAT TTAATTTAAC GGTACTGGCC
GCTGTGTTGG CGATTTTAGG TTACTCGCTC AATGACTCGA TCATTATTGC CGATCGTATT
CGTGAGCTAT TGATTGCAAA ACCTAAACTT GCGATTCAAG AGATTAACAA CCAAGCCATT
GTGGCGACAT TTTCCCGAAC TATGGTGACT TCAGGAACCA CCTTAATGAC CGTTGGTGCA
CTATGGATAA TGGGCGGAGG GCCGTTAGAA GGGTTCTCGA TAGCCATGTT TATCGGCATT
TTAACTGGCA CTTTCTCTTC GATATCAGTC GGAACCTCAT TACCGGAATT TTTAGGGTTA
GCCCCTGAGC ACTATCAAGT ACAAGCTATT ACAGATACTC CTTAG
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| Protein sequence | MKNINLTKWR YISSAISIFL MLASLTIVCV KGFNWGLDFT GGVVTEVQLD RKITSSELQP
LLNAAYQQDV SVISASEPGR WVLRYADTAQ SHVDIAQTLA PLGEVQVLNT SVVGPQVGKE
LAEQGGLALL VAMLAILGYL SYRFEWRLAS GALFALVHDV MFVLAFFSLT QMEFNLTVLA
AVLAILGYSL NDSIIIADRI RELLIAKPKL AIQEINNQAI VATFSRTMVT SGTTLMTVGA
LWIMGGGPLE GFSIAMFIGI LTGTFSSISV GTSLPEFLGL APEHYQVQAI TDTP
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