Gene SO_1191 details

Gene Information

• Locus tag: SO_1191
• Symbol: greA
• ID: 1169019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1234415
• End bp: 1234891
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637343144
• Product: transcription elongation factor GreA
• Protein accession: NP_716816
• Protein GI: 24372774
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAAGG TTCCTATGAC AGTTGTCGGT GCAGAACAGC TGCGTAAAGA GTTAGATATG 
CTCAAGTTTG AACGTCGCCC TAAAATCACT GAAGCGATTG CCTCAGCGAG AGAATTAGGC 
GATCTAAAGG AAAACGCTGA ATATCACGCT GCCCGTGAAG AGCAAGGCAT TTGTGAAGCG 
CGTATCCGTG ATATCGAAGG CAAACTTTCT AACGCGCAGA TCATCGATGT GACTAAGATG 
GTGAACAACG GTCGGATTAT TTTTGGCGCG ACTGTCACTA TCTTAAATCT CGATACTGAT 
GCTGAAGTCA CTTACCGTAT CGTGGGCGAC GATGAAGCCA ACATCAAAGA AAACCTGATT 
TCAGTCAACT CTCCGATTGC CCGCGGTTTA GTGGGTAAAA ACGAAGGGGA TGAAGTGTCT 
ATCACGACCC CTGGTGGTTT GACTGACTAC GAAATTATTT CGGTACAATA TATTTAA 

 

Protein sequence

MTKVPMTVVG AEQLRKELDM LKFERRPKIT EAIASARELG DLKENAEYHA AREEQGICEA 
RIRDIEGKLS NAQIIDVTKM VNNGRIIFGA TVTILNLDTD AEVTYRIVGD DEANIKENLI 
SVNSPIARGL VGKNEGDEVS ITTPGGLTDY EIISVQYI