Gene SO_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1181 
SymbolmiaB 
ID1169010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1223880 
End bp1225304 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content48% 
IMG OID637343128 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionNP_716806 
Protein GI24372764 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA AACTCCATAT TAAAACTTGG GGCTGTCAAA TGAATGAGTA CGACTCATCC 
AAGATGGCGG ATCTGTTAGG CGAATACCAA GGTTACACCT TAACTGAAGA AGCAGAAGAA
GCAGACATTT TGCTGCTAAA CACTTGTTCT ATCCGTGAAA AGGCACAGGA AAAAGTGTTC
CATCAGTTAG GCCGCTGGAA GACACTCAAA GATAAAAATC CCGACCTGAT TATTGGTGTG
GGTGGTTGTG TTGCATCCCA AGAAGGCAAA GCGATTAAAG ACCGAGCTCA ATGTGTCGAC
ATCATTTTTG GCCCACAGAC ACTTCACCGC CTGCCGGAGA TGATCGAACA AGTGCGTCGT
GGCGAAAAAG CCGTGATCGA CGTGAGTTTC CCTGAGATCG AAAAATTTGA CCGTCTTCCC
GAACCGCGCG CCGAAGGCCC AACGGCGTTT GTGTCAATCA TGGAAGGTTG TAGCAAATAC
TGTTCGTTCT GCGTAGTGCC TTACACCCGT GGCGAAGAAG TCAGCCGTCC ATCGGATGAC
ATCATCCTCG AAATTGCCCA ACTGGCAGAA CAAGGTGTGC GCGAAGTTAA CCTGCTCGGT
CAAAACGTTA ATGCTTACCG TGGTGCAACC CACGATGGCG GTATCTGTAC CTTCGCCGAG
CTATTACGCT ATGTTGCCGC TATTGATGGC ATTGATCGCA TTCGCTTCAC CACCAGTCAT
CCAATTGAAT TTACACAGGA TATCATCGAC GTTTACGAAG ATACTCCTGA ATTAGTGAGT
TTCTTGCACT TACCTGTGCA GTCAGGTTCT GACCGAATTC TCACGGCGAT GAAACGCGGC
CATATGGCGA TTGAATACAA ATCTATCATC CGCCGTCTGC GTAAAGCTCG TCCAGATATC
CAAATCAGCT CTGACTTTAT CATTGGCTTC CCTGGTGAAA CCCAAGAAGA CTTCGCTGAT
ACCATGAAGC TGATTGAAGA TGTAGCATTC GACCACAGTT TCAGCTTCAT CTATAGCGCA
CGCCCAGGCA CACCTGCGGC AGACTTACCT GACGACGTTG ATATGGAAGA GAAAAAACAA
CGTCTGGCGA TTCTGCAAGA CCGCATCACT CAGCAAGCCA TGCGTTACAG CCGCCATATG
ATGGGCACAG TGCAACGCAT TTTGGTTGAA GGCCCGTCGG TAAAAAACCC GATGGAACTG
CGTGGTCGCA CCGAAAACAA CCGTGTGGTG AACTTTGAAG GCTTACCAAA GCACATTGGA
ACCTTTGTGG ATGTTGAAAT TGTCGACGTT TACACTAACT CACTACGCGG TAAATTTATC
CGCGGTGAAG ATGAAATGGA TCTGCGCCGT AACCTGCGCC CATCGGATAT TCTGGCGAAG
CATAAGCAAG ATGATGATCT TGGTGTAACT CAATTTAAAC CTTAG
 
Protein sequence
MSKKLHIKTW GCQMNEYDSS KMADLLGEYQ GYTLTEEAEE ADILLLNTCS IREKAQEKVF 
HQLGRWKTLK DKNPDLIIGV GGCVASQEGK AIKDRAQCVD IIFGPQTLHR LPEMIEQVRR
GEKAVIDVSF PEIEKFDRLP EPRAEGPTAF VSIMEGCSKY CSFCVVPYTR GEEVSRPSDD
IILEIAQLAE QGVREVNLLG QNVNAYRGAT HDGGICTFAE LLRYVAAIDG IDRIRFTTSH
PIEFTQDIID VYEDTPELVS FLHLPVQSGS DRILTAMKRG HMAIEYKSII RRLRKARPDI
QISSDFIIGF PGETQEDFAD TMKLIEDVAF DHSFSFIYSA RPGTPAADLP DDVDMEEKKQ
RLAILQDRIT QQAMRYSRHM MGTVQRILVE GPSVKNPMEL RGRTENNRVV NFEGLPKHIG
TFVDVEIVDV YTNSLRGKFI RGEDEMDLRR NLRPSDILAK HKQDDDLGVT QFKP