| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1174 |
|---|
| Symbol | leuS |
|---|
| ID | 1169003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 1215819 |
|---|
| End bp | 1218398 |
|---|
| Gene Length | 2580 bp |
|---|
| Protein Length | 859 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637343121 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | NP_716799 |
|---|
| Protein GI | 24372757 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGC AATATAATCC CTCAGAAATT GAAGCCTTAG TGCAAAAGCA CTGGCACGAC
ACCAAAACCT TTGAAGTCAC TGAAGATCAG AACAAAGAAA AGTTTTATTG CCTTTCGATG
TTCCCGTATC CTTCAGGACG ACTCCACATG GGACATGTTC GCAACTATAC CATAGGTGAT
GTAGTTGCAC GCTTCCAGCG TCTTCAAGGC AAAAACGTGC TACAGCCTAT CGGTTGGGAC
TCTTTCGGTT TGCCTGCAGA AAACGCCGCG ATTAACAATA AAACCGCTCC CGCGCCATGG
ACTTATCAAA ATATTGAGTA CATGAAAAAC CAGCTAAAAC TGTTGGGTTT TGGCTATGAC
TGGAGCCGTG AAATCGCGAC TTGTACCCCA GAATACTATC GCTGGGAACA ATGGTTCTTC
ACTAAACTTT ACGAAAAAGG TTTAGTTTAC AAGAAGACAG CTTCTGTAAA CTGGTGTCCT
AACGATGAAA CTGTACTGGC TAACGAGCAG GTACAAGACG GTTGCTGCTG GCGTTGTGAT
ACCCCTGTGG AACAAAAAGA AATCCCACAG TGGTTTATTA AAATCACCGC CTACGCCGAA
GAACTGTTAA ACGATATCGA CACCTTAGAC GGCTGGCCTG AGCAAGTTAA GACTATGCAG
CGCAACTGGA TTGGTCGCAG CGAAGGCGTC GAAATGACCT TCGGTGTTGC AGGTAGCGAT
AAGTCATTCG ATATTTATAC CACCCGTCCT GATACGTTAA TGGGCGTAAC CTATGTAGCG
ATTGCCGCAG GTCATCCATT AGCTGAAATC GCCGCGCAAA CCAATCCAGA GCTTGCCGCC
TTTATCGATG AGTGCAAAAA CAGCACAACA TCAGAAGCCG AACTCGCGAC CATGGAAAAA
CGTGGCGTCG CAACAGGCCT TTACGCCATT CACCCTATCA CAGGTAAACA AGTGCCAATT
TGGGCGGCGA ATTTTGTGCT GATGAACTAT GGCACTGGCG CTGTGATGTC AGTACCAGGC
CACGACCAGC GCGATTATGA ATTTGCGAAA AAGTACCATC TGCCAATCGA AGCGGTGATT
AAACCCGCGG AAGGTGACTT GGATATCAGC GAAGCGGCAT ACACCGAAAA AGGCATTCTG
TTTAACTCTG GCGAGTTCGA CGGTTTAGAC TTTGACGGCG CCTTTAATGT CATCGCCAAC
AAACTGGTTG CTGAAGGTAA AGGCAAACGC CAAGTGAACT ACCGTCTACG CGACTGGGGT
GTATCACGTC AACGTTACTG GGGCGCGCCA ATTCCTATGG TGACCTTAGC CGACGGTACT
GTTATTCCAA CACCAGAAGA TCAACTGCCA GTCATTCTGC CAGAAGATGT AGTGATGGAC
GGGATCCAAA GCCCAATCAA GGCCGATAAA GAATGGGCGA AAACCCAAGT TAACGGTCAA
GACGCGCTGC GCGAAACCGA TACCTTCGAT ACCTTTATGG AGTCTTCTTG GTATTATGCT
CGTTATTGCA GCCCGCAAGC AGAGCAAATG CTAGACCCAA CCAAGGCTAA CTACTGGTTA
CCAGTGGATC AGTACATTGG TGGTATCGAA CATGCCTGTA TGCACTTGCT TTACTTCCGC
TTCTTCCACA AGTTGCTACG CGATGCAGGT CTAGTCAACA CCAATGAGCC AGCCAAACAA
CTGCTGACTC AGGGTATGGT GTTGGCCGAT GCCTTCTACT ACACCAACGA TAAAGGTGCC
CGTGTGTGGG TGTCTCCGCT TGATGTAGCG ACCACCGAAA AAGACGACAA GGGCCGTATT
ACTAAAGCTA TCGACAAAGA CGGTAACGAG CTGGTTTACA CCGGCATGTG CAAAATGTCT
AAGTCGAAAA ACAACGGTAT CGACCCACAA GTGATGGTTG AGAAATACGG TGCAGACACA
GTTCGTTTGT TTATGATGTT CGCCTCACCA CCAGAATTAA CCCTAGAATG GCAAGAGTCT
GGCGTTGAAG GTGCGCACCG TTTTATCAAA CGTCTGTGGA AACTGGCCAG TGAATATGTG
GCTCAAGACA ACAGCGAAGC GTTAGACGTT AGCAAGTTAA CAAGCGAGCA AAAAGCGCTT
CGCCGTGAAG TTCACAAAAC CATTGCTAAA GTGACCGATG ATATCGGCCG TCGTCAGATG
TTCAACACTG CGGTTGCCGC GGTGATGGAA CTGATGAACC ACCTGCAAAA AGCCCCGCAA
ACCACAGGTC AAGACCGAGC CATCATCGGC GAAGCCTTAT CTGCGGTAGT GCGTTTGCTG
TACCCCATCA TTCCACACGT GAGCTTTACT CTGTGGAATG AGCTTGGCAA TACCAACAGC
ATCGAAGATA GCCAATGGCC AGTTGTTGAT GAATCAGCCT TGGTGGAAGA CAGTAAACTG
ATCGTGGTGC AAGTGAACGG TAAAGTGCGC GCTAAGATCA CAGTCGCTGC CGATGCAGAC
CAAGCATCAG TTGAAGCACT GGGCATGGCG GACGAGCAAG TCATCAAGTA CTTAGATGGC
GTGACTGTCC GTAAAGTTAT CTATGTACCC GGTAAACTGC TCAGCATCGT AGCCAACTAA
|
|---|
| Protein sequence | MQEQYNPSEI EALVQKHWHD TKTFEVTEDQ NKEKFYCLSM FPYPSGRLHM GHVRNYTIGD
VVARFQRLQG KNVLQPIGWD SFGLPAENAA INNKTAPAPW TYQNIEYMKN QLKLLGFGYD
WSREIATCTP EYYRWEQWFF TKLYEKGLVY KKTASVNWCP NDETVLANEQ VQDGCCWRCD
TPVEQKEIPQ WFIKITAYAE ELLNDIDTLD GWPEQVKTMQ RNWIGRSEGV EMTFGVAGSD
KSFDIYTTRP DTLMGVTYVA IAAGHPLAEI AAQTNPELAA FIDECKNSTT SEAELATMEK
RGVATGLYAI HPITGKQVPI WAANFVLMNY GTGAVMSVPG HDQRDYEFAK KYHLPIEAVI
KPAEGDLDIS EAAYTEKGIL FNSGEFDGLD FDGAFNVIAN KLVAEGKGKR QVNYRLRDWG
VSRQRYWGAP IPMVTLADGT VIPTPEDQLP VILPEDVVMD GIQSPIKADK EWAKTQVNGQ
DALRETDTFD TFMESSWYYA RYCSPQAEQM LDPTKANYWL PVDQYIGGIE HACMHLLYFR
FFHKLLRDAG LVNTNEPAKQ LLTQGMVLAD AFYYTNDKGA RVWVSPLDVA TTEKDDKGRI
TKAIDKDGNE LVYTGMCKMS KSKNNGIDPQ VMVEKYGADT VRLFMMFASP PELTLEWQES
GVEGAHRFIK RLWKLASEYV AQDNSEALDV SKLTSEQKAL RREVHKTIAK VTDDIGRRQM
FNTAVAAVME LMNHLQKAPQ TTGQDRAIIG EALSAVVRLL YPIIPHVSFT LWNELGNTNS
IEDSQWPVVD ESALVEDSKL IVVQVNGKVR AKITVAADAD QASVEALGMA DEQVIKYLDG
VTVRKVIYVP GKLLSIVAN
|
|---|
| |