Gene SO_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1170 
Symbol 
ID1168999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1213093 
End bp1213422 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content48% 
IMG OID637343117 
Productiojap domain-containing protein 
Protein accessionNP_716795 
Protein GI24372753 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAGCG CCGAATTAAA GCAGTTTGTG GTCGATAAAA TCGACGATTT AAAAGCCCGT 
GACGTCGTGG TAATCGATGT CAGCAACCAA TCTAACATCA CCGACTATAT GGTGATTTGC
TCTGGTACAT CTAAAACCCA TGTTAAAGCT ATCGCCGAAA ACCTCGTGAT CGAAGCGAAA
GCCGCAGGCA TTCCGCCAAT CGGTATCGAA GGCCGCGACA GCAGCGAATG GGTATTGGTG
GATATGGGCA ACGTGATCCT GCATGTTATG CAAGATCAAA CCCGTGATTT CTACCAGCTT
GAAAAGCTCT GGTCAGAAAA GCAAGCCTAA
 
Protein sequence
MQSAELKQFV VDKIDDLKAR DVVVIDVSNQ SNITDYMVIC SGTSKTHVKA IAENLVIEAK 
AAGIPPIGIE GRDSSEWVLV DMGNVILHVM QDQTRDFYQL EKLWSEKQA