Gene SO_1168 details

Gene Information

• Locus tag: SO_1168
• Symbol: mrdA
• ID: 1168997
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 1210703
• End bp: 1212559
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637343115
• Product: penicillin-binding protein 2
• Protein accession: NP_716793
• Protein GI: 24372751
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCGCCAA AAAAGCGGAT AACCATGCAC GACCACGCCG CAGAGGCGTC ACTATTTAAG 
CGCCGTGCGC TGTTCACTTT TTTTTGTGTT GTCGCCCTTC TTAGCATGTT GGTGACCAAT 
CTTTATCATC TTCAGGTTGA ATCCTATAAA GATTACGCAA CACGATCGAA TGACAACCGT 
ATTCGGGTCG TCCCCATCGC CCCTAGTCGT GGCTTGATTT ATGATAGAAA CGGCGTGCTG 
CTCGCCGAGA ACCAACCCTT TTATTCCCTC GATTTGGTGC CTGAGAAAAT TGCCAATATG 
TCTGAAACCT TGGACGAATT GGGTAAGTTA ATTGAGATCA GCCCCGACGA GCGTGAAAAC 
TTTACCGAAG CATTAAAGTT TCACCGCCGC TTTAAGCCCT TAACCCTAAA AAATCAGCTG 
ACCGAAGAAC AGGTCGCTAT TTTTAGCGTG AACCAACATC GTTTTCCAGG GATCACCGTC 
GAAGCGGGTT TAAAACGTAA CTATCCCTAT GTCAGTCAGC TCACCCATGT GTTGGGTTAT 
GTGGGCAAAA TCAACACCCG AGATCGCGCC CAATTAGAGC GCAACGATCA GTGGAAAAAC 
TATGCCGCTA CTAAAGATAT TGGTAAGCAA GGCATTGAAA AATTTTATGA ATCACTCTTG 
CACGGTACGC CTGGCCACCT AGAGGAAGAA GTGAACAACC GCGGCCGAAC TATCCGCACC 
CTTAAAATTG TGCCACCAGA GCCGGGACAA GATATTTACC TCACCCTCGA TTTGCAATTG 
CAGCAAAAAG CCGTGGAATT ACTCCAAGGG CATAAAGGTT CTATTGTTGC TATCGATCCA 
AGGGATGGCG GGATTTTAGC CTTAGTATCC AGCCCTAGTT ACGATCCCAA TCAGTTTGTT 
CAAGGGATTA ACCGCAAAGA TTACAGTGAT TTACTAAACG ATAAATCGCG GCCGCTGATT 
AACCGTGCTA CCCAAGGCCA ATATGCGCCC GCATCAACGG TCAAACCCAT TATTGCCCTA 
CTGGGACTGG ATGAAAAAGC CGTAACTGAA CACACCCGCA TTTGGGACCC TGGCTTTTGG 
CAAATTCCCG GCGTTGAGCG TAAATACCGC GACTGGAAAC GTTGGGGCCA TGGCTGGGTA 
AACGTCTACA GTGCTATCGT AGAATCCTGC GATACCTACT TCTATGAATT GGCTTACAAA 
ATCGGTGTCG ACCCTATCGC TCGTTTTATG GAGCAATTTG GCTTTGGCCA AAATACCGGT 
GTCGACATTT TCGAAGAGTC GACGGGCAAC ATGCCTTCAA AGGAATGGAA ACGCTTAAAG 
TACAACCAAG CTTGGTATAT TGGCGACACG ATTTCAGTCG GTATTGGCCA AGGTTACTGG 
ACAGCAACAC CATTGCAACT TGCCAGTGCA ACAGCCATTC TCGCCAATAA TGGCCGTCGT 
TTTCCGCCGC ATTTGTTAAA GTCAATCAAA GATAATACAG CGAAAATTGA TTCGCCAATT 
AACGAGTTAC CGCCAATTGA GCTTAAAAAT CCGCGTAACT GGAAAATCAT CAACGAAGCC 
ATGCGCCAAA CCGCCCATAA ATCCCGCTTC ACCGACGCAA GCTATACGGC GGCGATGAAA 
ACCGGTACGG CGCAGGTAAT TGGTGTCGCA GAAAACACCA AATACGATGC TAACAAAATT 
GCCGAGCATT TCCGCGATAA CGCCCTCGTT GTCGCCTATG CGCCCTTTGA AAATCCAAAA 
ATCGTGCTGG CTGTGGTAAT GGAAAACGCC GGTTGGGGTG GGGCAAACGC AGGCCCTGTG 
GCCCGCGCCA TGCTCGATGA ATATATGCTC AGAGACACTT GGAAACCAAC GCCATGA 

 

Protein sequence

MSPKKRITMH DHAAEASLFK RRALFTFFCV VALLSMLVTN LYHLQVESYK DYATRSNDNR 
IRVVPIAPSR GLIYDRNGVL LAENQPFYSL DLVPEKIANM SETLDELGKL IEISPDEREN 
FTEALKFHRR FKPLTLKNQL TEEQVAIFSV NQHRFPGITV EAGLKRNYPY VSQLTHVLGY 
VGKINTRDRA QLERNDQWKN YAATKDIGKQ GIEKFYESLL HGTPGHLEEE VNNRGRTIRT 
LKIVPPEPGQ DIYLTLDLQL QQKAVELLQG HKGSIVAIDP RDGGILALVS SPSYDPNQFV 
QGINRKDYSD LLNDKSRPLI NRATQGQYAP ASTVKPIIAL LGLDEKAVTE HTRIWDPGFW 
QIPGVERKYR DWKRWGHGWV NVYSAIVESC DTYFYELAYK IGVDPIARFM EQFGFGQNTG 
VDIFEESTGN MPSKEWKRLK YNQAWYIGDT ISVGIGQGYW TATPLQLASA TAILANNGRR 
FPPHLLKSIK DNTAKIDSPI NELPPIELKN PRNWKIINEA MRQTAHKSRF TDASYTAAMK 
TGTAQVIGVA ENTKYDANKI AEHFRDNALV VAYAPFENPK IVLAVVMENA GWGGANAGPV 
ARAMLDEYML RDTWKPTP