Gene SO_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1162 
SymbollipB 
ID1168991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1205236 
End bp1205895 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content50% 
IMG OID637343109 
Productlipoate-protein ligase B 
Protein accessionNP_716787 
Protein GI24372745 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCTTGC AAAACACCAC TTTGCATATT CGGCATCTGG GACAACAAGA TTACGAGTCA 
GTGTGGCATG CGATGCAGCA TTACACTGAT ACTCGTAACA ACGATAGCCC AGACGAGCTG 
TGGATCGTTG AACATCCACC TGTGTTTACC CAAGGCCAAG CCGGTAAAAG CGAACATATT 
TTGAATCCGG GCGATATTCC CGTGATCCAA GTAGATCGTG GCGGCCAAGT CACTTACCAC 
GGGCCGGGGC AATTGGTTGT CTACCCACTC CTCGATATTA AACGCAGCAA GATTGGTGTC 
CGCCAGCTCG TGACGTATAT CGAGCAAAGC ATCATAGATA TGCTCGCCAA ATACACTATC 
AATGCCTACG CCAAGGCCGA TGCGCCAGGT GTGTATGTGG ATGAGCGCAA AGTGGCTTCC 
TTAGGTCTTA GGATCCGTAA AGGCTGCTCA TTCCATGGCC TAGCACTGAA TGTCGATATG 
GATTTGGCGC CGTTTCGCCG TATTAACCCT TGTGGTTATG CAGGCCTTGA AATGGTGCAA 
TGCAGGGAAC TGGGCGGCCC ACAAACTGTG ATAGAAGCCG GCGACCAACT CATTATTACC 
CTTAGCCAAC TATTGGGCTA CCAACATCTC GTTCATCATC AAGGATTAGC AGCGTCATGA
 
Protein sequence
MPLQNTTLHI RHLGQQDYES VWHAMQHYTD TRNNDSPDEL WIVEHPPVFT QGQAGKSEHI 
LNPGDIPVIQ VDRGGQVTYH GPGQLVVYPL LDIKRSKIGV RQLVTYIEQS IIDMLAKYTI 
NAYAKADAPG VYVDERKVAS LGLRIRKGCS FHGLALNVDM DLAPFRRINP CGYAGLEMVQ 
CRELGGPQTV IEAGDQLIIT LSQLLGYQHL VHHQGLAAS