| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1156 |
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| Symbol | |
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| ID | 1168985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1199204 |
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| End bp | 1201351 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343103 |
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| Product | TonB-dependent receptor |
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| Protein accession | NP_716781 |
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| Protein GI | 24372739 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTT ATTTTATTAG CAATCGCGCA GCGCTGCTGG GCGTGGTGTT ATTTGTGTTT
GATTCGAGTC TAACTGCGTT AGCGGTAGAG GATGCCCTTC ACAATACGGC GATACCGGAT
AGCGATATCG AGCGTTTAAG TATTCATTAT CGTCAGGCCT ATCGTGGCAA TGTGCCTGCA
ACTGAGCTTC CCCAAGCCAT TAGCGTGCTG GATGAGCAAC TGATTAAAGA CTCTGGGCTG
ACACGTTTCC AAGATTTGCT GGATTATTCC GCCAGTGTCG CGCGGCAAAA CAATGGCGGC
GGTTTGTGGG ATAGCTTTTC CCTGCGCGGG TTTCCAGGTA ATGAAAATAT GCCGTCGGGC
TATTTAATCA ATGGCTTTAA TGGTGGCCGA GGTTTTAGTG GCCACAGAGA TTTATCGAAT
GTCGCCTATG TGGAAATTTT AAAAGGCCCG GGTTCCGCCC TCTATGGTCG CTCTGAGCCC
GGTGGTACAG TAAATATTGT GACGAAGAAG CCCCAGTATC AAACCAGTGG CTATTTAAAG
GCATCAAAGG GAAGTTTTGA TCAATATCGC TTGGAAGGAG ATGTTACTTC TGGGATTACC
GACACCTTGG CCTTTCGGAT TAATGGTGCT TGGCAGGAGC ATGATAGTTT TCGCGATTAT
GTGTTTAGCG ATAAAAAAAT CGTCACTCCA TCGCTGCGCT GGCAATTGTC GGATGAGTCT
TCACTCTTAT ATGAGGTTGA ATATCTCAAA CAAGAACAGC TATTTGACCG CGGTATTGTG
GTCCTCAATA ACAACTTTAA CACAGTGCCT CGTTCGCGTT ACTTGGGCGA ACCCAATGAT
GGTGCGACAA CGGTTGATGC CACAGGGCAT CAGTTAACCT ATGAGTATGA GTTGAGCGAT
GATTGGTCGC TTACCGCTGG CTACAACTAC CGCGATTCGA GTTTAAATGG CTATTCTTCA
GATGCGGAAT TAGCCAAGGG ACGCCAATCC TTATATGACG ATGGGCGAAC GTTAACCAGA
CAACATCGTT ATCGGGATTA CGCCTCAGAG GATCATTCTG TACGCGCTGA ATTAAGCGGT
CAGTTCGATA CTGGCGGGCT TAGACACAAT CTGCTTTTGG GGGCTGATGC CTATCATTAC
CGGCTTAAAA CAGGGCTTTA CCGCTATCGA GGCCCAAAGG GAGCCTATGC TATCGATATT
TTTGCGCCGC AGTATGGCGC GGCTCAGCCT GATGTCAGTT TGCTGTACGA AAATCGTGAG
ACGCAAAATG CCTGGGGTGC CTATTTACAA GATCAGTTGG ATTTGACCGG GCACTGGAAA
CTGCATCTTG GCTTAAGGTT TGATCGTTAT CGTCAGGAAA TCGCTGAGCA GGTAAAAAGC
AGCTTGTCGG ATCAAACCGA CCAAAGAGTC AGCCCTAAGG TAGGGTTAGT CTATCAATGG
TCTGAGGCGT TAAGCTTTTA CGGCTCCTAT TCGGAAGGTT TTTTGCCGCT TTCAGGCACA
GACTATGCAG GGAACCCTTT CGAACCCGAA GAAAGTCAAT CAGTTGAGCT AGGTATTAAA
TTCAATAGCA CTGGGTTTGG GGTGCTGCCA ATCAATGGCA GTCTGGCGTG GTTTGATGCG
CAAAAGAGCA ATATCTTGAC CTCAGATCCG GTGAATGTGG GCTTTTCGGC GACCTTAGGC
GAAGCCAAAA GTACCGGTCT TGAGTTGGAT TTAGCGGCAG AGCTGACCGA GAACTTAGAG
GCTAAGTTAT CCTATGCCTA CCTTAATACC CGTACTGCAA ACGATAGTCT CAATCTGGAC
TGGGGTGTGC TTATTCCTGC CGGAAGTCCG CTGGTCAATG TGCCTAAACA TACAGGCAGT
TTAGTGCTTA AGCAGGACTT AAATGATTTT TCGATTGATG GTCATTTGGG CGTAACTTGG
CGCTATGTGG ATTCGCGTTT AGGGGATTCT GCTGATCCGA GTTTTCAATT ACCGAGTTAT
CAGCTGCTTG GTGTGTTTTT CGCTACTCGA CTTGGCGAAA GCGTAAGTCT GGCACTCAAT
GTCGATAACT TGTTGGATGA GCACTATATT GCCAGTAGTT ATTCGGCGCT ATGGCCCGTA
CCGGGTGAGC CACGTAATGT TAAAGTGAGT GTGAGTTATG AGTTCTAA
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| Protein sequence | MAAYFISNRA ALLGVVLFVF DSSLTALAVE DALHNTAIPD SDIERLSIHY RQAYRGNVPA
TELPQAISVL DEQLIKDSGL TRFQDLLDYS ASVARQNNGG GLWDSFSLRG FPGNENMPSG
YLINGFNGGR GFSGHRDLSN VAYVEILKGP GSALYGRSEP GGTVNIVTKK PQYQTSGYLK
ASKGSFDQYR LEGDVTSGIT DTLAFRINGA WQEHDSFRDY VFSDKKIVTP SLRWQLSDES
SLLYEVEYLK QEQLFDRGIV VLNNNFNTVP RSRYLGEPND GATTVDATGH QLTYEYELSD
DWSLTAGYNY RDSSLNGYSS DAELAKGRQS LYDDGRTLTR QHRYRDYASE DHSVRAELSG
QFDTGGLRHN LLLGADAYHY RLKTGLYRYR GPKGAYAIDI FAPQYGAAQP DVSLLYENRE
TQNAWGAYLQ DQLDLTGHWK LHLGLRFDRY RQEIAEQVKS SLSDQTDQRV SPKVGLVYQW
SEALSFYGSY SEGFLPLSGT DYAGNPFEPE ESQSVELGIK FNSTGFGVLP INGSLAWFDA
QKSNILTSDP VNVGFSATLG EAKSTGLELD LAAELTENLE AKLSYAYLNT RTANDSLNLD
WGVLIPAGSP LVNVPKHTGS LVLKQDLNDF SIDGHLGVTW RYVDSRLGDS ADPSFQLPSY
QLLGVFFATR LGESVSLALN VDNLLDEHYI ASSYSALWPV PGEPRNVKVS VSYEF
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