Gene SO_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1144 
Symbol 
ID1168974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1187307 
End bp1188395 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content43% 
IMG OID637343091 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_716769 
Protein GI24372727 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTTA ATTCCAGACT CAAAGCAGAA AACGAAGCTC TGAAACAAAA GCTCCTTGAG 
CAACAACGCA GATACGAAGT TGAAATTGAA GAGCTAAAAA ATATGGCCCG TGAAAACGAA
GCCATGCAAC AGCAGTCCCG TCAAAACACC GATCTTTATA GTGATGTGAT AGCCTGCCAA
AACCAAGGTG GCGAGATGTT AAATGCGGTG AGAGACGGCA TCGCAAGCAG TGCTGAAATA
CTCACTGAAG AAAAGGAATC ATTGTCTGAA TTAGATAAGA TTTTTGATCA AACGCGGGTA
GCCATTGTTA ATTTAGGCAA TCGAGCGACC TATATTAATA AGCAAGCAAC CAGTAGCATG
CAAGCGGTGA CTGAGCTCAA TAGTACCACC TCATCTATTA ATCAATTTGT TGCTGCCATT
CAAGGGATCT CAGAGCAAAC CAACCTACTG GCACTCAATG CTGCAATTGA AGCCGCTCGA
GCGGGCGAAG CAGGTCGAGG TTTTGCTGTT GTCGCCGATG AAGTCAGACA ATTAGCGAGC
AAGGCCCACG AAGCCAGTAG CCAAATTGAA AAACTGGTAA AGCAAATTGT TACGCAAGCC
TCTAATATCA AAGAAATTGT ACATAACAAC CAAAACAGTG CCCTCGATGT CGCTTCTTCT
TCAACGCAAA TCGGACAGGT GGTTGAAGAT GTACTGCAAC GTTCTAATAA TATGCAGCAG
GTGATTCACA ACGCCGCGAC AGCTTCTTTC TTAAATACCA CTAAACTCGA CCACGCTGTT
TGGAAGAGTA ATGTATACCA ACTCATTGAA AAAAATCAGC ACAGTCATGG CGTAAATTCC
CATACTGAAT GCCGTTTAGG TCAATGGTAT TTCAAAGGAT TTGGTGCTGA AAATTATCAG
CATTTAAGTA ATTTTAAGGC CTTAGATGCT CCCCATAAAG CGGTGCACGA TGCAGGTAAA
GCGGCGCTGG CGGCAAAGCA AAAAGGCAAT TTACCTGAAA TGGTTAAGCA ACTACGTTTA
ATGGAAGACT CAAGTATGCG AGTCGTCAAT TGCCTCGATA ATCTACTTCG AGATGTTTAT
CGCCAGTAA
 
Protein sequence
MWFNSRLKAE NEALKQKLLE QQRRYEVEIE ELKNMARENE AMQQQSRQNT DLYSDVIACQ 
NQGGEMLNAV RDGIASSAEI LTEEKESLSE LDKIFDQTRV AIVNLGNRAT YINKQATSSM
QAVTELNSTT SSINQFVAAI QGISEQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRQLAS
KAHEASSQIE KLVKQIVTQA SNIKEIVHNN QNSALDVASS STQIGQVVED VLQRSNNMQQ
VIHNAATASF LNTTKLDHAV WKSNVYQLIE KNQHSHGVNS HTECRLGQWY FKGFGAENYQ
HLSNFKALDA PHKAVHDAGK AALAAKQKGN LPEMVKQLRL MEDSSMRVVN CLDNLLRDVY
RQ