Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1144 |
Symbol | |
ID | 1168974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1187307 |
End bp | 1188395 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637343091 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_716769 |
Protein GI | 24372727 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTTTA ATTCCAGACT CAAAGCAGAA AACGAAGCTC TGAAACAAAA GCTCCTTGAG CAACAACGCA GATACGAAGT TGAAATTGAA GAGCTAAAAA ATATGGCCCG TGAAAACGAA GCCATGCAAC AGCAGTCCCG TCAAAACACC GATCTTTATA GTGATGTGAT AGCCTGCCAA AACCAAGGTG GCGAGATGTT AAATGCGGTG AGAGACGGCA TCGCAAGCAG TGCTGAAATA CTCACTGAAG AAAAGGAATC ATTGTCTGAA TTAGATAAGA TTTTTGATCA AACGCGGGTA GCCATTGTTA ATTTAGGCAA TCGAGCGACC TATATTAATA AGCAAGCAAC CAGTAGCATG CAAGCGGTGA CTGAGCTCAA TAGTACCACC TCATCTATTA ATCAATTTGT TGCTGCCATT CAAGGGATCT CAGAGCAAAC CAACCTACTG GCACTCAATG CTGCAATTGA AGCCGCTCGA GCGGGCGAAG CAGGTCGAGG TTTTGCTGTT GTCGCCGATG AAGTCAGACA ATTAGCGAGC AAGGCCCACG AAGCCAGTAG CCAAATTGAA AAACTGGTAA AGCAAATTGT TACGCAAGCC TCTAATATCA AAGAAATTGT ACATAACAAC CAAAACAGTG CCCTCGATGT CGCTTCTTCT TCAACGCAAA TCGGACAGGT GGTTGAAGAT GTACTGCAAC GTTCTAATAA TATGCAGCAG GTGATTCACA ACGCCGCGAC AGCTTCTTTC TTAAATACCA CTAAACTCGA CCACGCTGTT TGGAAGAGTA ATGTATACCA ACTCATTGAA AAAAATCAGC ACAGTCATGG CGTAAATTCC CATACTGAAT GCCGTTTAGG TCAATGGTAT TTCAAAGGAT TTGGTGCTGA AAATTATCAG CATTTAAGTA ATTTTAAGGC CTTAGATGCT CCCCATAAAG CGGTGCACGA TGCAGGTAAA GCGGCGCTGG CGGCAAAGCA AAAAGGCAAT TTACCTGAAA TGGTTAAGCA ACTACGTTTA ATGGAAGACT CAAGTATGCG AGTCGTCAAT TGCCTCGATA ATCTACTTCG AGATGTTTAT CGCCAGTAA
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Protein sequence | MWFNSRLKAE NEALKQKLLE QQRRYEVEIE ELKNMARENE AMQQQSRQNT DLYSDVIACQ NQGGEMLNAV RDGIASSAEI LTEEKESLSE LDKIFDQTRV AIVNLGNRAT YINKQATSSM QAVTELNSTT SSINQFVAAI QGISEQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRQLAS KAHEASSQIE KLVKQIVTQA SNIKEIVHNN QNSALDVASS STQIGQVVED VLQRSNNMQQ VIHNAATASF LNTTKLDHAV WKSNVYQLIE KNQHSHGVNS HTECRLGQWY FKGFGAENYQ HLSNFKALDA PHKAVHDAGK AALAAKQKGN LPEMVKQLRL MEDSSMRVVN CLDNLLRDVY RQ
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