Gene SO_1141 details

Gene Information

• Locus tag: SO_1141
• Symbol: carA
• ID: 1168971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1181758
• End bp: 1182918
• Gene Length: 1161 bp
• Protein Length: 386 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637343088
• Product: carbamoyl phosphate synthase small subunit
• Protein accession: NP_716766
• Protein GI: 24372724
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0505] Carbamoylphosphate synthase small subunit
• TIGRFAM ID: [TIGR01368] carbamoyl-phosphate synthase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGTCG CGTTGACAAA GTCTGCCTTA CTCGTACTCG AAGATGGAAC CGTATTCACT 
GGCACAGCGA TAGGTGCCGA TGGTCTCTCA GTTGGTGAAG TTGTTTTTAA CACTTCGATG 
ACGGGATACC AAGAAATTTT AACTGATCCC TCTTATTCAC GCCAAATAGT AACTTTAACC 
TACCCCCACA TTGGTAATAC TGGTACCAAT AATGAAGACG TCGAATCCAA TGGGGTTCAT 
GCTTGTGGTT TAATCATTCG CGATCTTCCG CTCATAGCAA GTAGTTTCCG TAATCAACAA 
AACCTCAGCG ATTATCTCAA AGCAAACAAC GTTGTTGGCA TCGCAGATAT CGATACTCGT 
AAATTAACTC GAATCCTCCG TGAAAAAGGT GCCCAAGCGG GTTGCATCAT GGCGGGTGCT 
GACTTAGATG AAGTTAAAGC CCTTGCAGCG GCTAAAGCCT TCCCCGGTTT GAAAGGTATG 
GATTTAGCGA AAGAGGTTAC TACCGACAAA GCATACCCAT GGCGTAAAGG TAGCTGGCGT 
TTAGTGGGCG GTTTGCCTGC CGATACTCCA GCAGAAGCGC TTAAATACAA AGTGGTTGCC 
TACGACTACG GTGTGAAGCA AAACATTCTA CGCATGTTGG TTGACCGTGG CTGCGACGTC 
ACTGTCGTTC CGGCTAAAAC ACCTGCGTCG GAAGTGTTAG CGATGAACCC AGACGGGGTG 
TTTCTCTCTA ACGGCCCTGG TGACCCAGAG CCTTGTGATT ACGCGATTGA AGCGATTCAA 
CAAATCCTGA AAACCGATAC GCCGATTTTC GGTATCTGTT TAGGCCACCA GTTACTGGCA 
TTGGCATCAG GCGCGAAAAC CTTAAAGATG AAGTTTGGTC ACCACGGTGC AAACCACCCT 
GTGAGCAATA TCGAAAAAGG TAACGTTATG ATCACCAGCC AAAACCATGG TTTTGCTGCT 
GATGAAGCCA CATTACCCGC CAATATCAAA GTGACCCATA AGTCACTGTT CGATGGTTCA 
TTGCAAGGTA TCCATCTGAC GGACAAACCT GCGTTCAGCT TCCAAGGCCA CCCTGAAGCG 
AGCCCTGGTC CGAACGATGC GGCCCCACTG TTCGATCACT TTATCGAGCT CATTGAACAC 
TATCGTCAGA ACGCTAAGTA A 

 

Protein sequence

MEVALTKSAL LVLEDGTVFT GTAIGADGLS VGEVVFNTSM TGYQEILTDP SYSRQIVTLT 
YPHIGNTGTN NEDVESNGVH ACGLIIRDLP LIASSFRNQQ NLSDYLKANN VVGIADIDTR 
KLTRILREKG AQAGCIMAGA DLDEVKALAA AKAFPGLKGM DLAKEVTTDK AYPWRKGSWR 
LVGGLPADTP AEALKYKVVA YDYGVKQNIL RMLVDRGCDV TVVPAKTPAS EVLAMNPDGV 
FLSNGPGDPE PCDYAIEAIQ QILKTDTPIF GICLGHQLLA LASGAKTLKM KFGHHGANHP 
VSNIEKGNVM ITSQNHGFAA DEATLPANIK VTHKSLFDGS LQGIHLTDKP AFSFQGHPEA 
SPGPNDAAPL FDHFIELIEH YRQNAK