Gene SO_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1114 
SymboldinP 
ID1168948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1157158 
End bp1158231 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content47% 
IMG OID637343065 
ProductDNA polymerase IV 
Protein accessionNP_716739 
Protein GI24372697 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGAAAA TCATTCATGT CGATATGGAT TGCTACTTTG CTGCGGTTGA AATGCGGGAT 
TTTCCCGAAT ACCGTGGTAA ACCGCTGGCC GTTGGTGGTA GTCGTGAGCG GAGAGGTGTT 
ATCAGCACCT GTAATTATGA GGCGCGCCGA TTTGGCGTAC GCTCTGCTAT GGCGACAGCT 
TATGCGCAGA AGTTGTGTCC TGATTTAATT CTTGTTCCCG GTCGAATGCA GGTCTACAAA 
GACGTTTCAT CGCAAATTCG TGCCATCTTT TCCCGCTATA CAGAACTGAT AGAGCCTCTG 
TCTTTAGACG AAGCCTATTT AGATGTCAGC GACTGTAAGC TGCATAAAGG CTCTGCAACT 
TTAATTGCCG AAGCCATTCG CCGCGATATT TTGGCCGAAA CTGGGCTTAC GGCATCGGCT 
GGTGTTGCGC CTGTAAAATT CCTCGCTAAG GTGGCCTCGG ACTTAAATAA GCCCAATGGT 
CAGTATGTGA TTCCGCCCGA TAAGGTTCCT GAGTTTATTA GAACCTTATC CCTACGCCAG 
ATCCCTGGTG TGGGGAAAGT CACTGCGGAA AAACTGTCCT CTTTAGGTTT AAATACCTGT 
GGTGATGTAC AAACTTATCC AAAACAAGAG CTTATTACTC GCTTTGGAAA ATTTGGCGCT 
GTATTAATTG AAAGGGCCCA GGGGATTGAT GATCGAGGCT TGTCTGTAAG TCGCGAACGT 
AAATCTGTCG GCGTTGAGAC CACACTAGCA CAGGATATTT ACACCCTTGA GCAATGCCAG 
CAAGTGATGC CGGGGTTAAT TCAAGAGTTA TCAACCCGTT TAAGCCGTAG CGCCAAGGAT 
CGACAAATCC ATAAGCAGGT GGTGAAGCTT AAATTCAGTG ACTTTAAACA AACGACCATT 
GAACATCGCA GTAATGATGT GTCTGTGATG ATGTTTTATG AATTATTGGC GCAGGCAATT 
GCAAGGCAGG ATGGGAGGGG AATCCGGCTA CTCGGCGTAG CTGTTGGGCT TAGTGATAAA 
TCACTGATTA GCGAGGTTGA TCCATTGCAA ACCCAACTGG TGTTATCTAT TTAA
 
Protein sequence
MRKIIHVDMD CYFAAVEMRD FPEYRGKPLA VGGSRERRGV ISTCNYEARR FGVRSAMATA 
YAQKLCPDLI LVPGRMQVYK DVSSQIRAIF SRYTELIEPL SLDEAYLDVS DCKLHKGSAT 
LIAEAIRRDI LAETGLTASA GVAPVKFLAK VASDLNKPNG QYVIPPDKVP EFIRTLSLRQ 
IPGVGKVTAE KLSSLGLNTC GDVQTYPKQE LITRFGKFGA VLIERAQGID DRGLSVSRER 
KSVGVETTLA QDIYTLEQCQ QVMPGLIQEL STRLSRSAKD RQIHKQVVKL KFSDFKQTTI 
EHRSNDVSVM MFYELLAQAI ARQDGRGIRL LGVAVGLSDK SLISEVDPLQ TQLVLSI