Gene SO_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1071 
Symbol 
ID1168908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1111521 
End bp1112114 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content46% 
IMG OID637343027 
Producthypothetical protein 
Protein accessionNP_716698 
Protein GI24372656 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCTTAT GTCAAATGCC ACCCCTAAAA GGATCACACT TGGAAGCGTT ACTCGCCTCA 
ACCTTTACGG TTGCTATTGC CGAGATTGGC GATAAAACTC AACTACTTGC CCTATTACTT 
GCCGCAAGAT TTAAAAATAA AACCGCGATT ATTTTGGGTA TTTTCCTGTC AACCCTGTTT 
AACCATTTTG CCGCCGCTTG GCTTGGGCAA TGGGCGATTA ACTGGGTCAA CCCTGATGTT 
GCGCGTTATT TAGTGGCCGC CTCCTTCTTC GCGATTGCCC TTTGGGTGTT AATCCCTGAT 
AAAGTCGATG CCGAAGAAAG TCGGTTTTAT AAAATGGGGC CTTTTGTCGC AACCTTTATT 
CTGTTCTTTA TTGCCGAAAT GGGCGACAAA ACCCAAATAG CTACCGTTGT GTTATCAGCA 
AAATACGATG CATTAGCTAT GGTGGTAGCA GGTACAACTA TCGGCATGCT ACTGGCGAAC 
GTCCCCGTAG TCATTGCAGG ACACTTTAGC GCCGAAAAAT TACCGATGAA GTGGATCCAT 
AGGGGCTGCG CAATTTTGTT TGCCCTACTC GGGGTCGCAA CCTTAATCTA TTAA
 
Protein sequence
MCLCQMPPLK GSHLEALLAS TFTVAIAEIG DKTQLLALLL AARFKNKTAI ILGIFLSTLF 
NHFAAAWLGQ WAINWVNPDV ARYLVAASFF AIALWVLIPD KVDAEESRFY KMGPFVATFI 
LFFIAEMGDK TQIATVVLSA KYDALAMVVA GTTIGMLLAN VPVVIAGHFS AEKLPMKWIH 
RGCAILFALL GVATLIY