| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1061 |
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| Symbol | |
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| ID | 1168898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1100866 |
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| End bp | 1102266 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343017 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_716688 |
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| Protein GI | 24372646 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA CCTTCATTCA TTCTTTTATC AGACCCACAA TCAGCACGCT CATGCTCGCC
GCCATCTTAG GCTCGAGTGG TTGTGCTTAT AACAGTATTT TTATTAATTA CCCGGCACAA
ATTGCGCCAG TAAAACAAGA ACTCAATACT GCTAAGCCCA TGGCTGAGAT AGATAAATTA
GCCAGTAATA TCCAAGGTAA TGACGGTTTA CTTTACGCAC AAGAGGCGGG GCGCGTGGCC
CAAGTTGCGG GGGATTTTGC CAGCAGTAAA AAGTACTACC AGCAAGCGGT TGCAGCCTAT
ACGGCCTTTG ATGACAAAGC CAAAATTAGT GCCAGCGATA TCGGCGCAAC GGCCACCAGC
TTAGTGTTAA ACGATAATGC CATACCCTAT CGCGGCCCGG GCTACGAGCG GATTATGCTA
CACCAATATC AGGCGCTAAA TTACCTCTTC AGCGGCGACT ATCAAGGCGC ATTGGTGGAA
GTTCGTCGCA GTAACGAACT GCAAAGCTCA GAGCAGGAAC GCTATCAAAA GTCGCAAAAA
TCAGTACAAG CTATGGCCAA TGGCACAATC GATGCTGAGG TCAATCGGCT CGGTCAAGCG
GCTGGCACTG TGACCAGTTC CTTCCTAAAC GCCTATAGTT ATTACACAAC GGGCGTACTT
CACGAAGTGC TTGGTGAGCC AAACGACGCC TTTATTGATT ATCGTAAAGC GGCGCAAATC
ACCCCAGATA ACACTTATCT GCAACAGGAT TTAGTGCGCC TTGCCAAACA ACTCGGCATG
CCACAATACG ATGAATTTAA AAAGCGCTGG GGCGATGCCA AACTCCCAAA AGCGGGTGAA
GGCCAAGTGA TTTTAATGGT CGAAAAAGGC TTTGTACCTG AAAAACAAGC GCTCACAGTC
CCCTTTACCA TTCATGGCAA CTGGCAAACC GTGTCTCTAG CCACCTACGG ACCAAACAAT
AGCTATGTAC CAGAGACGCA GGTACAAGGC TTAGGTACAG TGCTCAAAAC GGAACCTATC
GCCAATATTG ATGCCTTAGC GATTACCGCC TTGAAGGAAG ATTTACCCGG CACCTTAGTC
CGCCAAGTGG CGCGGGTATA TGCTAAATCG GAGATGGCTT ACCAGGTCGA AAAAAGCGGT
AAGCCAGGCA ATAATGCCGC CGATATTGGC AGTATCGCCA TGCAGATTTT TAACGTTGTC
ACCGAACAGG CGGATCGCCG CAGTTGGTTG ACACTGCCAA AACAAGCGCA AATTGGCAGA
CGTTATCTCA ATCCGGGTGA ATATACTCTG CAATTGGATA AGGCTCCACC GGCAAAAATT
GAAGTTGCTG CAGGCAAGAC CACCTTGGTC TGGGCAATTG ATACTGGTAA TTACACCCGA
ATTTATTCAA TAATCATTTA A
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| Protein sequence | MKTTFIHSFI RPTISTLMLA AILGSSGCAY NSIFINYPAQ IAPVKQELNT AKPMAEIDKL
ASNIQGNDGL LYAQEAGRVA QVAGDFASSK KYYQQAVAAY TAFDDKAKIS ASDIGATATS
LVLNDNAIPY RGPGYERIML HQYQALNYLF SGDYQGALVE VRRSNELQSS EQERYQKSQK
SVQAMANGTI DAEVNRLGQA AGTVTSSFLN AYSYYTTGVL HEVLGEPNDA FIDYRKAAQI
TPDNTYLQQD LVRLAKQLGM PQYDEFKKRW GDAKLPKAGE GQVILMVEKG FVPEKQALTV
PFTIHGNWQT VSLATYGPNN SYVPETQVQG LGTVLKTEPI ANIDALAITA LKEDLPGTLV
RQVARVYAKS EMAYQVEKSG KPGNNAADIG SIAMQIFNVV TEQADRRSWL TLPKQAQIGR
RYLNPGEYTL QLDKAPPAKI EVAAGKTTLV WAIDTGNYTR IYSIII
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