| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1051 |
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| Symbol | mdoD |
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| ID | 1168889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1087671 |
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| End bp | 1089464 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343009 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | NP_716679 |
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| Protein GI | 24372637 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAG AGGTATGTTT ATCACTGTCA TCAACAGTTC TCCACAGGGC AGTCACTGCA
ATAATGCTTA CTTTTGCAGA GAAATGTCAG GAAGTTACAC CAATTCAGAG TCTGCTTATG
CAACCCAATT TATTTCCCGA ACAAAGACAT TTAAATCGTG AGCCGATGGT GATGCCATCG
TTAGAAGCTC CTTCTACCCG AAGCCGTTTA CAACGCATGG TGGGCAGCGT ATTACTGACC
TGCAGTGTGT TGTTAAGCTT ATCTGCTTGT GCAGCGGGTA AAGCGAGTGC ACCGCAGGAA
GAAGAGTTTA GCTACGCTTG GTTGAAAGGC TATGCTCATA CGCTGGCGAC TGAGTCCTAT
GTAAGTCATA AGGGTGAGTT GCCAAAAAGC TTACAGGGCA TGAGCTGGGA TGATTACCAG
CAATTCCATT TCAAGAAAAA AGCCGCACTG TGGCGTGAAG ACGATTCAGA GTTTCGCGCC
GAGTTGTTTC ACTTAGGTCT CTATTTCGAT ACTCCTGTCC ATATTTATCA ATTGGAAAAC
GGCAAGGCTA AGCGGATTGA ATATTCTCCT TCTATGTTCG ATTACGGTAA GTCGAAGGTG
AAGGGCAGCC AATTACCTAA AGATTTAGGT TTTGCTGGCT TTAGAATGCA GTTCAACACC
GATTGGCAAC GTGATGTGGT CGCCTTCTTA GGGGCTAGCT ATTTTCGCGC CGTAGGTCAG
GAAATGCAGT ATGGTCTTTC TGCCCGTGGT CTAGCGGTGG ACACTGCGCT GCCTAAGCCT
GAAGAATTCC CCATGTTCAC CCGTTTTTGG TTAGAGAAAC CACAGCCGGG CTCAAATATT
GCGACCGTCT ATGCACTGCT AGACTCGCCA AGCGTCACTG GTGCTTATCG TTTCGATATC
GAGCCGGGTG AGCGTTTGAA AATGAAGGTC GATGCAGCCA TATATCCGCG TAAAGCCATC
GAACGTTTGG GTGTTGCGCC GCTGACCAGT ATGTTTATGG TGGGTGAGAA CGATCGCCGC
ACTGGTTACG ACTGGCGTCA AGAGATCCAC GATTCAGACG GTCTAGCCAT GCACACTGGT
AACGGTGAAT GGATTTGGCG CCCGCTAGGC AACCCAAGTA ATCTGCGATT CAACGCCTAT
AGCGATGAGA ATCCTAAGGG ATTTGGTTTA TTGCAGCGCG ATCGTAATTT CGACCATTAT
CAAGATGATG GTGTGTTTTA CGAGAAGCGT CCAAGTCTGT GGATTGAGCC AACGGGCAAT
TGGGGTAAAG GCTCAGTTCA GTTAGTTGAA ATTCCAACGC TGGACGAAAC CTTCGACAAT
ATCGTGGCTT TCTGGAATCC TGCTGAGCCT ATTCAACCTG GCCAAGAGCT ACTGTACAGC
TACAACATGT ACTGGGGTGG CATTCCACCT GAACAGTCTC CACGCGCTCG CGTAGTGGAT
ACTTTTACCG GTATTGGTGG CGTGGTAGGT CAAAAGCGTA AGTACTATAG CAAGCGCTTT
GTAATTGATT TTGCTGGTGG TTCTTTACCT ATGCTGGGTA AAGATGCCCA AGTGAAAGCG
GTGATTTCAA CATCTCAAGG TCGCGTAGAA ATCGAATCTG CTCGTCCACA GCATGCGATC
AATGGTTACC GCGCTATGTT CGACATTGTG CCACCAGAGG ATAGTGTAGA GCCGATTAAC
CTAAGAGTTT ACTTAGAAGT GGACGGCCAG CCGTTAACTG AGACGTGGAT GTACCAGTGG
ACACCACCGC CAATGAACGA GCGTGAGCTG CACAACGCCG GTCATCTTCA GTAA
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| Protein sequence | MKIEVCLSLS STVLHRAVTA IMLTFAEKCQ EVTPIQSLLM QPNLFPEQRH LNREPMVMPS
LEAPSTRSRL QRMVGSVLLT CSVLLSLSAC AAGKASAPQE EEFSYAWLKG YAHTLATESY
VSHKGELPKS LQGMSWDDYQ QFHFKKKAAL WREDDSEFRA ELFHLGLYFD TPVHIYQLEN
GKAKRIEYSP SMFDYGKSKV KGSQLPKDLG FAGFRMQFNT DWQRDVVAFL GASYFRAVGQ
EMQYGLSARG LAVDTALPKP EEFPMFTRFW LEKPQPGSNI ATVYALLDSP SVTGAYRFDI
EPGERLKMKV DAAIYPRKAI ERLGVAPLTS MFMVGENDRR TGYDWRQEIH DSDGLAMHTG
NGEWIWRPLG NPSNLRFNAY SDENPKGFGL LQRDRNFDHY QDDGVFYEKR PSLWIEPTGN
WGKGSVQLVE IPTLDETFDN IVAFWNPAEP IQPGQELLYS YNMYWGGIPP EQSPRARVVD
TFTGIGGVVG QKRKYYSKRF VIDFAGGSLP MLGKDAQVKA VISTSQGRVE IESARPQHAI
NGYRAMFDIV PPEDSVEPIN LRVYLEVDGQ PLTETWMYQW TPPPMNEREL HNAGHLQ
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