Gene SO_1048 details

Gene Information

• Locus tag: SO_1048
• ID: 1168886
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1085613
• End bp: 1086347
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637343006
• Product: hypothetical protein
• Protein accession: NP_716676
• Protein GI: 24372634
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1346] Putative effector of murein hydrolase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAGCC TTAACTTAAG CCCAGCGGCA GTATCTGAGT TAGTGTTTTC TCAGACGGGA 
TTGGCGCTCA TCAGCTTGTT ACTCACGTTA TTTTGTTATT TTGCGGCCAA GATATTGTAT 
CAACGCCACC GAGTATGGTG GTTAGCGCCG ATTGTACTCG CGCCCGTGGT GATCACGCTC 
TTGGTGTTTA ATCTCGATAT TCCATTGCCG ACTTATTTTG AATACACCCA TTGGTTAATG 
GCCATGTTGG CTCCTGCAAC GATTGCATTT GCTTTGCCTA TTTATCGGGA GCGTAAACTC 
ATTCGCCAAT ATCCGCTGAC CATTGCCTTT GGCGTGATTG CAGGGTTGTT ATTGGGCATG 
GTCTCGAGCT GGCTATTAGT CAAGTTTGTG CCTTTGCCAG TAGAGCTTTC TAAGAGTTTG 
TTAGTTCGCT CCGTCTCGAC GCCCTTTGCG ATGGAGGCTA CCGGTGCCTT TGGTGGTGTG 
CCAGAACTTA CCGCCATGAT GGTACTCATC ACTGGCATTA TCGGCATGTT AGTGTGCGAG 
CCACTCTTTA AGCTGATGCA TATTCGTACA TCGTTAGGCA AGGGGGTGGC CTTGGGCGCT 
TCAGCCCATG GTGCGGGCGC AGCAAAAGCC AGTGAGTTAG GCCAGCAAGA GGGCGTAATT 
GCAAGTTTAA CCATGATTTT TATCGGTATT GCGATGGTGT TGGGAGCCCC GTTTTTTGCG 
CTGATTTTTA GTTAA 

 

Protein sequence

MSSLNLSPAA VSELVFSQTG LALISLLLTL FCYFAAKILY QRHRVWWLAP IVLAPVVITL 
LVFNLDIPLP TYFEYTHWLM AMLAPATIAF ALPIYRERKL IRQYPLTIAF GVIAGLLLGM 
VSSWLLVKFV PLPVELSKSL LVRSVSTPFA MEATGAFGGV PELTAMMVLI TGIIGMLVCE 
PLFKLMHIRT SLGKGVALGA SAHGAGAAKA SELGQQEGVI ASLTMIFIGI AMVLGAPFFA 
LIFS