Gene SO_1017 details

Gene Information

• Locus tag: SO_1017
• Symbol: nuoF
• ID: 1168858
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 1055382
• End bp: 1056767
• Gene Length: 1386 bp
• Protein Length: 461 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637342978
• Product: NADH dehydrogenase I subunit F
• Protein accession: NP_716645
• Protein GI: 24372603
• COG category: [C] Energy production and conversion
• COG ID: [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
• TIGRFAM ID: [TIGR01959] NADH-quinone oxidoreductase, F subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGAAC AACTCGAAGT CAAAACCCGA GCCGAGAATG TTCTTACCGA GCAGGCCCGC 
GGCCTTGGCC TCTTCTACGG CCCGGCGCAG GTTGATGGCG GCATCCACGT ACTCGCCACG 
CAGGAAGATG TAGCCGCGAT AGGCCTTGAG AGCCTTGGCG GAGATGATCA TCCCCTCGAT 
CAACAGATGG GGTAG 

 

Protein sequence

MSLPQSKVLT SFGTANRTPR AAETHPLTWR LRDDGQPVWL EEYQTKQGYD AVRKALGQMS 
PDEIVSTVKD AGLKGRGGAG FPTGVKWGLM PKDESMNIRY LLCNADEMEP NTWKDRLLME 
QLPHLLIEGM IISAKALKAY RGYIFLRGEY VDAAINLRRA VEEAKAAGLL GKNILGSGFD 
FELFVHTGAG RYICGEETAL INSLEGRRAN PRAKPPFPAV SGVWGKPTCV NNVETLCNVP 
AIIGNGVAWY HTLALPGSED HGTKLMGFSG KVNNPGVWEL PFGITARELF EGYAGGMRSG 
YRLKAWQPGG AGTGFLLPEH LDAQMYTAGI GKVGTRMGTG LAMAVDDSIS MVSLLRNMEE 
FFARESCGWC TPCRDGLPWS VKLLRSLERG EGQEGDLATL EQLCNFLGPG KTFCAHAPGA 
VEPLASAIKY FRSEFEAGIK GSGDNRKSIK GIQPNLLGER W