Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0999 |
Symbol | pbpG |
ID | 1168840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1029978 |
End bp | 1030943 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637342960 |
Product | D-alanyl-D-alanine endopeptidase |
Protein accession | NP_716627 |
Protein GI | 24372585 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATCT CTTATCTGCT TGGTAGTTTT ATTTTGGTAT GCAGCAGTTT AACTGTTGCC GCGACAGCGC ATTCAGCCGA TTCGGCCTCT GTCACTACAA AAAGCACCGC CACTAAAGCA ACAACTCCTA AAAAAGCTCA TACGAAGCAA GAAGTTGCGG CCAATAGTGC ACTGGTGGTT GATCTTAAAA CCAATGAAAT TCTCTATTCC AGTAATCCCG ATGCGGTGAG GCCCATCGCC TCGGTGACTA AACTGATGAC AGCCATGGTG ACCTTAGACG CTAAGTTGCC GATGGATGAA AAGCTCACCA TCAATATCAA GGATACTAAG GAAATGCGCG GTGTATATTC TCGGGTGCGC ATAGGTAGCG AAATTAGCCG TAAAGAGATG TTATTGCTGA CATTAATGTC ATCTGAAAAC CGTGCAGCCG CAAGTCTTGC CCACCATTAT CCCGGTGGGC ATAAAGCTTT TATTAAGGCG ATGAATGCTA AAGCCAAAGC CTTAGGGATG AAAAATAGCC GCTTTGTTGA GCCTACAGGG CTATCGGCGA AAAACGTATC CAGTGCGCGT GATTTAGTGG TGTTACTCAA GGCCAGCCAA GGCTATCCCA TGTTAGGCCA GTTAAGCTCT ACCGAAAAGA AAACCGTAAC CTTTGGTAAG CCAAAGTACA GCCTCGATTT TAGAAATACT AACCGATTGG TTTATAAAGA TAATTGGGAT ATTCACCTCA CCAAAACTGG CTTTACCAAT GCAGCTGGCC ATTGTCTTGT GATGCGTACT GAAATGGCCA AGCGTAAAGT GGCTTTTGTG GTGCTTGATG CCAAGGGCAA ATATACCCAC ATGGCCGATG CCAACCGTTT ACGCAACTGG CTAGAAACGG GTAAAGTTAC GCCGATCCCT GCAGATGCTA AGCAATATAA AAAGCAGCGC AGTCAGCAGC AATTGGCTAA GGTCAGCGAG ACCTAA
|
Protein sequence | MKISYLLGSF ILVCSSLTVA ATAHSADSAS VTTKSTATKA TTPKKAHTKQ EVAANSALVV DLKTNEILYS SNPDAVRPIA SVTKLMTAMV TLDAKLPMDE KLTINIKDTK EMRGVYSRVR IGSEISRKEM LLLTLMSSEN RAAASLAHHY PGGHKAFIKA MNAKAKALGM KNSRFVEPTG LSAKNVSSAR DLVVLLKASQ GYPMLGQLSS TEKKTVTFGK PKYSLDFRNT NRLVYKDNWD IHLTKTGFTN AAGHCLVMRT EMAKRKVAFV VLDAKGKYTH MADANRLRNW LETGKVTPIP ADAKQYKKQR SQQQLAKVSE T
|
| |