Gene SO_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0999 
SymbolpbpG 
ID1168840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1029978 
End bp1030943 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID637342960 
ProductD-alanyl-D-alanine endopeptidase 
Protein accessionNP_716627 
Protein GI24372585 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCT CTTATCTGCT TGGTAGTTTT ATTTTGGTAT GCAGCAGTTT AACTGTTGCC 
GCGACAGCGC ATTCAGCCGA TTCGGCCTCT GTCACTACAA AAAGCACCGC CACTAAAGCA
ACAACTCCTA AAAAAGCTCA TACGAAGCAA GAAGTTGCGG CCAATAGTGC ACTGGTGGTT
GATCTTAAAA CCAATGAAAT TCTCTATTCC AGTAATCCCG ATGCGGTGAG GCCCATCGCC
TCGGTGACTA AACTGATGAC AGCCATGGTG ACCTTAGACG CTAAGTTGCC GATGGATGAA
AAGCTCACCA TCAATATCAA GGATACTAAG GAAATGCGCG GTGTATATTC TCGGGTGCGC
ATAGGTAGCG AAATTAGCCG TAAAGAGATG TTATTGCTGA CATTAATGTC ATCTGAAAAC
CGTGCAGCCG CAAGTCTTGC CCACCATTAT CCCGGTGGGC ATAAAGCTTT TATTAAGGCG
ATGAATGCTA AAGCCAAAGC CTTAGGGATG AAAAATAGCC GCTTTGTTGA GCCTACAGGG
CTATCGGCGA AAAACGTATC CAGTGCGCGT GATTTAGTGG TGTTACTCAA GGCCAGCCAA
GGCTATCCCA TGTTAGGCCA GTTAAGCTCT ACCGAAAAGA AAACCGTAAC CTTTGGTAAG
CCAAAGTACA GCCTCGATTT TAGAAATACT AACCGATTGG TTTATAAAGA TAATTGGGAT
ATTCACCTCA CCAAAACTGG CTTTACCAAT GCAGCTGGCC ATTGTCTTGT GATGCGTACT
GAAATGGCCA AGCGTAAAGT GGCTTTTGTG GTGCTTGATG CCAAGGGCAA ATATACCCAC
ATGGCCGATG CCAACCGTTT ACGCAACTGG CTAGAAACGG GTAAAGTTAC GCCGATCCCT
GCAGATGCTA AGCAATATAA AAAGCAGCGC AGTCAGCAGC AATTGGCTAA GGTCAGCGAG
ACCTAA
 
Protein sequence
MKISYLLGSF ILVCSSLTVA ATAHSADSAS VTTKSTATKA TTPKKAHTKQ EVAANSALVV 
DLKTNEILYS SNPDAVRPIA SVTKLMTAMV TLDAKLPMDE KLTINIKDTK EMRGVYSRVR
IGSEISRKEM LLLTLMSSEN RAAASLAHHY PGGHKAFIKA MNAKAKALGM KNSRFVEPTG
LSAKNVSSAR DLVVLLKASQ GYPMLGQLSS TEKKTVTFGK PKYSLDFRNT NRLVYKDNWD
IHLTKTGFTN AAGHCLVMRT EMAKRKVAFV VLDAKGKYTH MADANRLRNW LETGKVTPIP
ADAKQYKKQR SQQQLAKVSE T