Gene SO_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0987 
Symbol 
ID1168829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1015101 
End bp1016765 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content45% 
IMG OID637342950 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_716616 
Protein GI24372574 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATC TTAGCCTGCG TAATAAATTA CTGCTGTTAT CTTTGTTTCC CCTCATATTT 
ACTTTATTAG TGCTAATTAC TCTCTCCTAC TATGTTGAAC AGGAATCCCT TGCAGAAGAA
GTGGTGACCT TTAGAACAAA ATTAGTCGGT GAACGTAAAC AACAAATTAA AGAAGCGACA
GAGATTGCCT CTGGAATTGT TAACTACCAA CTGTCGTTAA AGGATAAAGG TAATGTAAAT
CAAGCACTGC GAGATATTCG TTTCGGCAGT GCGGGTTACT TTTTTATGTA TGATTCCCAA
GGCAAAAATA TTTTCCATGC CTTAATGCCT AATTTAGAAG GGCAAAACAA AATCGATATG
ACCGACCCGC GCGGAACCAA GATTATTGTT GGTCTTTTGG ATGCGGCAAA ACGGGGCGAT
GGTAATTTTT CTTATTATTA CCAAAAACCT AATACTAACG AGCAAATTGA GAAAATAAGC
TTCGTGATGA TGGTCCCCGG TACGGACTGG ATGCTGGGTA CTGGTGCTTA CATCGACGAT
ATTGAGGCTG TAGTGGAGGA TTATCGTCAA ACCGTGACTG AGCAAATGGC TGAGAAATCT
CTAATGATCC TCTTAATTGC CTTGGTTTTA ACCGGTGCCA CGGCCTTTGT CATCATGGTT
GCCGCTCATC GAATGGTCGT ACCGATCAAA AATATGGCTG ATAATCTTAA CGATATTGCT
AAAGGTGAAG GGGATTTAAC TAAACGCTTA AGTGTTAAAG GCGAGGATGA AATTGCGCAA
CTAGGTCGAG CTTTTAACTT ATTTGTCGAT AAGCTACAAC ACATTATCGG CGATGTGGCG
AGTGCGACCG CCAAAGTAAA AACAGCCGCT AATGCAATCC ACGATCAAAC CAAGGTGATG
TCAAGCCAAC TGCTCAGCCA TAACAATGAG ACAGATCAAG TAGTTACCGC AATTACAGAG
ATGTCTTCTA CTGCGAGTGA AGTCGCGCAA AATACCACTC AAGTAGCCGA AGCGACTCAA
GCGGCGACAG GCGATGTGGC TAATGCCCAG CGCTGTGTCG ATGCTTCACT GGAAGAAATT
GCCGCTTTGA TGGAGCAAAT CAACCATGCG GCGGGCAGCA TCAAGTCCTT AAGCGAGCAA
TCACAGAAGA TTAACAGTGT ACTTTCGGTG ATAGGTGGCA TTGCGGAACA GACAAACCTA
TTAGCCTTAA ATGCGGCGAT TGAAGCGGCC CGTGCCGGTG AACAGGGCCG AGGTTTTGCT
GTGGTTGCCG ATGAAGTTCG CAGTTTAGCC AGCCGCACCC AAGCAAGTAC TCTAGAGATC
AACGAGATGC TATCGGCATT GCATAAGTTA GTATCGCAGG CGGTGAAAAC CATGGATGAG
AGTCAGCAGA GTTGTGTTCG CTCGGTTGAA TCTTCCCGCG CTATTTCTGA AAGTCTAGGT
TCTGTGACTT CGGCGGTAAC GGCGATTAAT GATATGAGTA CCCAAATTGC CACAGCGGCG
ACTGAGCAAA GCTCTGTGAC CGAAGAAATT AACCGCAACG TTTATGCCAT ACAAGAAATC
GTTAATGAGC TACTGCATTC CAGTGAACAT GCGGCTAGGG TGAGTCAAAC AGTGTCGCAG
GAAGGGACGA ATCTCGGCAA CTTGGTTGGA CAATTTAAGA TTTAA
 
Protein sequence
MSNLSLRNKL LLLSLFPLIF TLLVLITLSY YVEQESLAEE VVTFRTKLVG ERKQQIKEAT 
EIASGIVNYQ LSLKDKGNVN QALRDIRFGS AGYFFMYDSQ GKNIFHALMP NLEGQNKIDM
TDPRGTKIIV GLLDAAKRGD GNFSYYYQKP NTNEQIEKIS FVMMVPGTDW MLGTGAYIDD
IEAVVEDYRQ TVTEQMAEKS LMILLIALVL TGATAFVIMV AAHRMVVPIK NMADNLNDIA
KGEGDLTKRL SVKGEDEIAQ LGRAFNLFVD KLQHIIGDVA SATAKVKTAA NAIHDQTKVM
SSQLLSHNNE TDQVVTAITE MSSTASEVAQ NTTQVAEATQ AATGDVANAQ RCVDASLEEI
AALMEQINHA AGSIKSLSEQ SQKINSVLSV IGGIAEQTNL LALNAAIEAA RAGEQGRGFA
VVADEVRSLA SRTQASTLEI NEMLSALHKL VSQAVKTMDE SQQSCVRSVE SSRAISESLG
SVTSAVTAIN DMSTQIATAA TEQSSVTEEI NRNVYAIQEI VNELLHSSEH AARVSQTVSQ
EGTNLGNLVG QFKI