| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0952 |
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| Symbol | recJ |
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| ID | 1168798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 988352 |
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| End bp | 990076 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342919 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | NP_716581 |
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| Protein GI | 24372539 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCCATA AGATAATCCG TCGTCCAACC GTTGATGATA GCCATTTACC CACGCACCTT
CCGCCACTGT TAAGACAGCT CTATGCTCGC CGAGGCGTGC TGCCGAGTGA GTGCGAACTG
GTGCTTAAGG GCTTGTTAAG GCCCGATACC ATGAAGGGAT TGGATCTCGC TGCCAAGCTG
ATTGCCGATG CGATGCAGCT TGATAAGTCG ATACTGATCG TGGGAGATTT TGATGCCGAT
GGCGCCACTT CGACCAGTGT GTGTATCCTC GCGCTACGGA TGATGGGCGC AAGCAAGGTC
GATTATCTGA TCCCCAACCG TTTTGACTAT GGTTACGGTT TAAGCCCTGA AATTGTCGCC
GTGGCAGCAT CTAAACAGGC GCAATTGCTG ATCACCGTCG ATAATGGCAT TTCTTCTATC
GAGGGCGTTG CTGCTGCTAA AGCCTTTGGT ATGCAAGTGG TGATCACCGA CCATCATTTA
CCTGGCCATG AATTACCCAA GGCCGATGCC ATAGTGAATC CCAACCAGCC CGGGTGCCAG
TTTGCCAGTA AATCCATCGC TGGTGTGGGG GTGGCTTTTT ATCTGATGAC GGCGCTTAGG
GCAGAGCTGC GCGCTCGTAA CTGGTATCAA GCCCGTGGCA TTGCTGAGCC TAATCTCGGC
ACTTTGCTGG ATATTGTCGC CCTTGGCACT GTGGCCGACG TAGTATCGCT TGATACCAAT
AATCGCATTT TGGTTGAGGC GGGATTACAG CGGGTGCGTA GCGGTCGTTG CCGTGTGGGC
ATTACCGCCT TACTGGAAGT CGCGAAACGC AATCCAGCTC GGATTGTCGC CTCTGACTTT
GGTTTTGCCG TGGGGCCAAG ACTCAATGCC GCAGGCAGGC TCGATGAAAT GGCGCTAGGG
GTTGAAACCT TGCTGTGCGA AGACATGATG TATGCAAGGC GGATGGCGGC AGAACTCGAT
AGCCTCAACC AAGAGCGACG TGAGCTTGAG GTTGGGATGC AGCAAGAGGC ACTTAAAAGT
CTTGAATATC TAAAGCTTAA TGAAGAACAG CTTCCTTGGG GGATTGCACT CTTTCAAGAG
GATTGGCATC AGGGCGTTAT TGGTATTCTT GCCTCGCGGA TTAAAGATAA ATATCACAGA
CCTGTAATCG CCTTTGCCGA CGCGGGTAAT GGCGAAATTA AAGGCTCGGC GCGCTCCATC
AAAGGCTTGC ATATGCGCGA TCTGCTTGAG TTGGTTAACT CTCGCCATCC TGGGCTTATC
AGCAAATTTG GCGGTCACGC AATGGCGGCG GGCTTGACCT TAAAGTCAGG TGGCTTTGCA
ACCTTTGCCA AAGCCTATGA TGATGCGGTG CGTGAACAAT TAAAGCCTGA GCAGCTTACG
GGGGAACTAT GGTCCGATGG CGAGTTAACC CCAACCGAGT TAACGCTTGA AATTGCCCAG
TTGCTTCGCA ATGCGGGGCC TTGGGGCCAG TCCTTCGAAG AGCCGTTATT TGATGGTTAT
TTTAAGATCA TCCAGCAGCG GATTGTGGGG GATCGCCACC TTAAATTAGT GCTTGAAACC
CAATGTGGCA CTGTGATGTT AGATGCGATT GCCTTTAATG TGGCTTTACA CACTTGGCCC
GATGCGACTA TTCAGCATGC GCGCATCGTC TATAAGCTGG ATGTGAACGA ATATCGCGGT
AATTTCACCT TGCAGTTGAT GGTCGAGCAA ATCGAGCCGA TGTGA
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| Protein sequence | MIHKIIRRPT VDDSHLPTHL PPLLRQLYAR RGVLPSECEL VLKGLLRPDT MKGLDLAAKL
IADAMQLDKS ILIVGDFDAD GATSTSVCIL ALRMMGASKV DYLIPNRFDY GYGLSPEIVA
VAASKQAQLL ITVDNGISSI EGVAAAKAFG MQVVITDHHL PGHELPKADA IVNPNQPGCQ
FASKSIAGVG VAFYLMTALR AELRARNWYQ ARGIAEPNLG TLLDIVALGT VADVVSLDTN
NRILVEAGLQ RVRSGRCRVG ITALLEVAKR NPARIVASDF GFAVGPRLNA AGRLDEMALG
VETLLCEDMM YARRMAAELD SLNQERRELE VGMQQEALKS LEYLKLNEEQ LPWGIALFQE
DWHQGVIGIL ASRIKDKYHR PVIAFADAGN GEIKGSARSI KGLHMRDLLE LVNSRHPGLI
SKFGGHAMAA GLTLKSGGFA TFAKAYDDAV REQLKPEQLT GELWSDGELT PTELTLEIAQ
LLRNAGPWGQ SFEEPLFDGY FKIIQQRIVG DRHLKLVLET QCGTVMLDAI AFNVALHTWP
DATIQHARIV YKLDVNEYRG NFTLQLMVEQ IEPM
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