| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0950 |
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| Symbol | xerD |
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| ID | 1168796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 986481 |
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| End bp | 987383 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637342917 |
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| Product | integrase/recombinase XerD |
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| Protein accession | NP_716579 |
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| Protein GI | 24372537 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTAAAA CCTACCAGTG CGATCCACTG ATTGATGCAT TTCTTGATGA TCTTTGGTCT
AGTAAAGGCT TAAGTGATAA CACCTTGAGT GCCTATCGCA CCGATTTACG TCATTTTGAT
CGCTATCTGC AAAGCCAAGG ATTGCGTTTG CGTGATGTGG GTCAAGCTGA CGTTCGCGCT
TATTTAGCTT ATCGAGTTGA ACAACAATTT GCCCGCACCA GTAGCGCCCG TTTGCTGAGT
AGTTTGCGGC GTTTTTACAA CTATTTACTG CAGACCAAGC AGATTTCGGG TGACCCCATG
GCACAGATTG AATCGCCTAA GCTGAGTCGG CATTTACCTG ATTCTTTAAG CGAGTCACAG
GTCGATAGGC TACTTGCTGA GCCCAATGTA GACGACCCTG TTGAGTGCCG TGATAAAGCC
ATGCTTGAGT TGTTATATGC CACTGGACTG CGGGTGAGCG AGCTGGTGGG ACTCACGATG
GAGCAGATGA GCCTGCGCCA AGGTTTAGTG CGGATTATTG GCAAGGGCGG TAAAGAACGT
CTCGTGCCTA TGGGGGAGAT GGCCATAACT GAGGTGGAAC ATTATTTAAC ATCCGCGCGG
CATGAGCTCT TAGGTCATAT TCAATCCGAT GTGGTGTTTC CCTCGAAGCG CTCGCAAATG
ATGACGCGGC AAACTTTCTG GCATCGCATT AAACTCTATG CCAGTCGAGC TGGGATTGAA
ACCGAATTGT CGCCCCATAC TCTGCGCCAT GCTTTTGCCA CCCATTTACT TAACCATGGG
GCCGATTTGC GAGTGGTACA ATTGTTGTTA GGGCACAGTG ACTTATCGAC AACTCAAATC
TATACCCATG TGGCAAGAGC AAGATTGCAG GAGTTACATC AGCAGCATCA TCCACGGGGA
TAG
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| Protein sequence | MAKTYQCDPL IDAFLDDLWS SKGLSDNTLS AYRTDLRHFD RYLQSQGLRL RDVGQADVRA
YLAYRVEQQF ARTSSARLLS SLRRFYNYLL QTKQISGDPM AQIESPKLSR HLPDSLSESQ
VDRLLAEPNV DDPVECRDKA MLELLYATGL RVSELVGLTM EQMSLRQGLV RIIGKGGKER
LVPMGEMAIT EVEHYLTSAR HELLGHIQSD VVFPSKRSQM MTRQTFWHRI KLYASRAGIE
TELSPHTLRH AFATHLLNHG ADLRVVQLLL GHSDLSTTQI YTHVARARLQ ELHQQHHPRG
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