| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0934 |
|---|
| Symbol | |
|---|
| ID | 1168780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 965457 |
|---|
| End bp | 966194 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637342901 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_716563 |
|---|
| Protein GI | 24372521 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3137] Putative salt-induced outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG TACTGACCGC GGCACTATTG ATGACGGCGC CATTTATGGC GAATGCGGGA
GCTGATTTTG TTAAAGGTGA TAAGACATTT GCAGGCGAAG CCGAGCTAGG TGCTACCTTA
ACCACAGGCA ATACTGACAC CTCATCTTAC AAAGGTCGCT TAAACTTCAA ACACGAATTA
GGTGACTGGG AAAACCAATA TCTTTTAGAA GGTTTATATA AAGAAGATAC GGGTGCTGTG
ACCGCTAAGC GTTATTTAGC CGGTGCGCAG GGCAACTATA AGATGAATGA CCGCAGTTAT
TGGTTTGCCA ATGCTAATTA CGAAGTTGAT CCCTTTACCG GTTATGACTA CACCCTATCG
GGTGCAACGG GTTATGGTCA TAGACTCTTG GACACCAGCA AGACTTTCTT AGATGTTGAA
ATCGGTCCCG GTTATATCTA TCAACGCCTT GATTCAGAAC AGGCCCTGCT AGAAGGCACT
GATTCCAATG ACAGCGTTGT TGCCCACGGC GTGATTAACT TCGAAACTGA AATTACTGAA
ACCTCGAAAT TCCAGCAACG TTTTGTGGCC GACTATGGTG AAAAATTAGA CGCGCGCTCG
GAAACTTCAC TCACAGCCAA TATTATTGGT GCCTTGGCGA TGAAGTTTGC CATTATCGTA
CGTTATAACA GTGAGCCACT GGACGATAAA AAGAGCACCG ATACCGAAAC GAATATGACT
TTGCTCTACT CGTTCTAA
|
|---|
| Protein sequence | MKKVLTAALL MTAPFMANAG ADFVKGDKTF AGEAELGATL TTGNTDTSSY KGRLNFKHEL
GDWENQYLLE GLYKEDTGAV TAKRYLAGAQ GNYKMNDRSY WFANANYEVD PFTGYDYTLS
GATGYGHRLL DTSKTFLDVE IGPGYIYQRL DSEQALLEGT DSNDSVVAHG VINFETEITE
TSKFQQRFVA DYGEKLDARS ETSLTANIIG ALAMKFAIIV RYNSEPLDDK KSTDTETNMT
LLYSF
|
|---|
| |