Gene SO_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0880 
Symbol 
ID1168727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp909203 
End bp910186 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content49% 
IMG OID637342850 
Producthypothetical protein 
Protein accessionNP_716511 
Protein GI24372469 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAACG CTTTTACACC GCCTTGGTGG GCCAAAAGTC CCCATGTACA AACGATTTTG 
CCCGTATTCA CTAAAGTGGC CAAACCTGTG CTTGAACGGC AACGACTAGA GCTGCCCGAC 
GGCGATTTTA TCGATTTAGA TTGGCAAGCC CCCCCAAAAG TCGGTAAACC GATTGTGGTC 
ATCATCCATG GATTAGAAGG CAGCGCACAG TCGCACTATG CCAGACGTAT ACTGCAAGCC 
TGCAAAACGC AGGGGCTGGC TGCGGTAGTT CACCACCACC GGAGCTGCTC GGGAGAAGCC 
AATCGCCTCG CCCGCAGTTA TCACAGTGGT GACACAGATG ACCTGCAGTT TAGCTTAAGC 
CTGCTGCAAC AAACCTATCC GCAATCACCG TTATTGGCCG TAGGTTACAG CTTAGGTGGC 
AATGTATTGA CAAAATACCA AGGCGAATAT CAAGACCAAA GTCTGTTAAC GCGCGCCGTA 
GTGGTGTCAG CCCCATTGCA ATTATCAGCG TGCGCTAAGC GTTTAGAGCA TGGTTTCTCA 
ACGGTTTACC AAAGCCATTT GGTCAAACAG TTACAACATA AGGTCAATCA AAAGCTCACC 
GCCCCAGATT TGGCAGGCAC TATGTCATTG ACCCCAAAGC AAGTTGCCAA TCTCAATACC 
TTTTATGACT TTGACGATAA AGTTACTGCG CCGCTACATG GATTTTTAGG CGTAGAAGAT 
TACTATACTC GTGCTAGCGG CTTACCTTAT GTTAATCGCA TCACCAAACC CACACTGATA 
CTGCACGCTT TGGACGATCC CTTTATGACG GATGAGGTCA TCCCCCATCC AAGCCAGATT 
TCTGAGCATG TAGAATACGA ACTCCATGCC CATGGTGGCC ATGTCGGTTT TATCGAAGGC 
GGTACACCGT GGAAGCCACG CTATTATCTA GAGCGGCGCA TTTTAGACTT TTTACTCGCC 
AATGACGCGT CATCGGCACC TTAA
 
Protein sequence
MPNAFTPPWW AKSPHVQTIL PVFTKVAKPV LERQRLELPD GDFIDLDWQA PPKVGKPIVV 
IIHGLEGSAQ SHYARRILQA CKTQGLAAVV HHHRSCSGEA NRLARSYHSG DTDDLQFSLS 
LLQQTYPQSP LLAVGYSLGG NVLTKYQGEY QDQSLLTRAV VVSAPLQLSA CAKRLEHGFS 
TVYQSHLVKQ LQHKVNQKLT APDLAGTMSL TPKQVANLNT FYDFDDKVTA PLHGFLGVED 
YYTRASGLPY VNRITKPTLI LHALDDPFMT DEVIPHPSQI SEHVEYELHA HGGHVGFIEG 
GTPWKPRYYL ERRILDFLLA NDASSAP