Gene SO_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0857 
Symbol 
ID1168704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp879890 
End bp880561 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content50% 
IMG OID637342827 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_716488 
Protein GI24372446 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAG TCGCCAAGCT TATCCAAGTG AGTAAAAGTT TTCGCGACGG CGAGCAGCGC 
CACACTGTGC TGCAAGCGGT CGATTTAACT TTGCATCAAG GGGAGACTAT CGCACTCACC 
GGCCCAAGTG GCAGCGGTAA AAGCACTTTA CTGAATCTGA TTGCGGGCTT TGAAACCGTA 
GACAGTGGCC AGATAGTGCT GAATCATCAA TCCACCACCA AGTGGCAAGA TAGGCAATGG 
AGTGAGTTTA GGCGTACCCA TTTAGGCGTA GTATTCCAGC AATTTAATTT ACTGACACCG 
CTAAATGTTA AAAATAATAT CGGCTTTTCT CTGTACCTTA ACGGTGATAG CTGGAATCCT 
TGGTGCGATT ACTTGGTGGA AAAGCTCGGG TTAGCGGCAT TGTTAAATCG GCAGGTTGAA 
GCACTTTCCG GCGGACAACA ACAGCGGGTC GCGATAGCCA GGGCATTAGC CCACAATCCG 
AGTTTACTGC TGGCCGACGA ACCCACAGGT AACTTAGATG ACGAATCTGG TAAACAGGTG 
ATGTCACTAC TATGCGAACT TGCCAAAGAG AGCCAAACCA GCATTTTGAT GGTCACCCAC 
AGCGAAGAGT GCGCCGCCTT TATGAACAAA CGCTGGCATC TGTCCCACGC CGCAGTGTCC 
ATCTCTGGCT AG
 
Protein sequence
MSEVAKLIQV SKSFRDGEQR HTVLQAVDLT LHQGETIALT GPSGSGKSTL LNLIAGFETV 
DSGQIVLNHQ STTKWQDRQW SEFRRTHLGV VFQQFNLLTP LNVKNNIGFS LYLNGDSWNP 
WCDYLVEKLG LAALLNRQVE ALSGGQQQRV AIARALAHNP SLLLADEPTG NLDDESGKQV 
MSLLCELAKE SQTSILMVTH SEECAAFMNK RWHLSHAAVS ISG