| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0840 |
|---|
| Symbol | |
|---|
| ID | 1168687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 856575 |
|---|
| End bp | 861128 |
|---|
| Gene Length | 4554 bp |
|---|
| Protein Length | 1517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637342810 |
|---|
| Product | acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase |
|---|
| Protein accession | NP_716471 |
|---|
| Protein GI | 24372429 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA ATAATCAGCC CAAACACATG ACTCAAGCCC AAACGCCCGA TCCGCTTTTT
TTACAGGCCG AGCATTTGGC AAAGGATTTT TCTCTGTTTC CTAAACACAG CAAACAGAGT
TTATCAGAAG AAATTAAAGG TCTTTTAAAC GACGATGCCA TTCAGGCAAA TTTAAAAGAC
TTGGCATCAT TAGATGTCGA CGGTTACGTA GCAAAAGTGA TCCAGCCGAC CCAAGATAAA
GGTCGTCCTG GTGCGAAACG TATCATTGCA GACCTAAAAG GTCGCTTGAT CACGGAAACC
CACTTGGGCT CTTTCTATAG CGCTGAGGTC GAGCTGAATT TCGGTTCACG CACTCGTCGT
ATCGGCTTTA TTGCCCAAGA GCGCACAACC GCTAACGGTG CGTGGATGCC TGAGCATCAC
TATGCGGCTT GCAAAGCGAT TCGTCATTTT GCCGAATTGT CTATGCCTAT CGTCTATTTA
ATCGATACCC CTGGGGCCGA TGCAGGCGAA GTGGCCAACA GCCAAAACCA AGCACATTCT
ATTTCTAAGG CGATTGCCGA AAGTGCCAAC GTTGACGTGC CTACCGTGGG TATCGTTATC
GGTGCGGGTT ACTCTGGTGG CGCGATTCCA TTAGCAGCGG CAAACATCCT GTTATCGCTG
CGCGATGGTA TTTTCAACAC GATCCAGCCA CAAGGTCTGC AAAGTATTGC CCGTAAGTAC
AACTTATCTT GGCAAGAATG TGCGAAATCA GTGGGTGTAT CACCAGAAGA GCTATATACC
TCAGGTTGTA TCGACGGAAT CATCGATTTC TCACCAGGGG ATCGTGACGA GCGTCAGCAC
AATTTACGCC GTGCGATAAT CAGTAGTATC GAGGCGGTTG AGCGTGCAGC GGTAAACTTT
GTGCGTGAAT CAAAAGATTT ACGCGAGCAT TATGATCGCA GTTTAGCGCG TTTCCTTAAT
CCATCTAAAA ATCTGATGGC ATTAGAGCTA AATGCAGAAT TAGCCGTAGC TACTAGCCCA
ACCAACCACC ATAACCTGTT TGGTAGTGCC TATCGTTACC TGCGTTATCT AACGCTGCGT
AGCCGTATTC ATTCGATCTC TCAGGAGCAA TACGGACGTT TGTCACGTGT CAGTGTGCCT
GAGGGGGATC TGTTAGCACG TATCCAGCAG GAGCAAGATC GTGTATTCCA AGCGTGGTTA
GCTAGCCCCG ATAAGCTGGT TTACGATGAA GATCTCAACA AGTTATGGGC GAACTTTATT
GCTAAGCGCG ATGAAATCTC AACCGAACGT AATATGCTGA CACGTTTTAT TTTGGGTGAG
CCAAAAGAGA ACTATAAAAA AGCGCGTAAG GCACTGTTAT TTAACATCAG TTGGTCTTTA
TATCACCGTT GGAAGAGCAA TGCTGCGAAC AACTTTAAGG GCTTAATTCA GCATCTTGAA
AATCTGCCTA AGTCTGTGAC TCAAGCAAAG TGGCCTGAGC TAAATCAACT GACAGTGCTT
GACGTTGTTG TTAACGATGA GCTGCGTGAA GACTTTATTT GGCAATGTCA TAACATCCTG
ATCTTTAACT CACTCTACGA CAACGTTGTG GGTAGCTTAG CGTCAATCGC GAAAGAAGCC
ATGATGTCAA AGAGCTTGTC TCGTAATTCA GTGAACAATC TGCTGCATAA GTCGATTGAC
CATGCGCTGT CGACTCAAGA TACGGCTAAC GACAAGGCGA AATTCTACAA GTGGCTCAAG
TATTTTATGG GCCAATCTAA CCGTGCCGAT TTACTGGTGC GTGTAGAGCA ATGGAAGAGT
GTGGGCTTCC CGCAGCTTAA CGACAGTTTA TTCGTTATCC TGACTTACTT CTTCGAGCGT
TTATTACCTG AATACTTCGA CAGTGAAAGC GATCACAGTA AATATACTGG CGCGATTAAC
CCTGTACGTA TCGGGCGTCG TAAGGACTTC TGGAACCGCT TGACCATGGG TTATCAGGAT
CTGTTGATCC AAAAAGTACT ACGTGACGAA AAACGTACTG GCAAGATGAC GTGGGAAAAT
GTGATTAAGC AATTCTTCAC CCATTTCGAC GAAATCAATG GCGACAAGAT GTCGGCTAAC
TTGCTCAACT TCCCTGGTTT CCGTCTATCA ATTGAAGATG CGTTAGATAA AGGTATTCGT
CCTTGCGGTC TGATCACTGG TATTGCTGAC TTTAAAGAAA AAGGTCAAAA AGTGCGTGTG
GGTCTGGCTG TGTCTAACAC TGCATTCCAA GCCGGTGCCT TCGATATGGC CAGTGCCGAG
AAGTTTTCTG CGCTGCTGAT CGAGTGTGCT AAGCGTAAGC TACCAGTGGT TTGCTTTATC
AGCTCAGGCG GTATGCAAAC CAAAGAAGGT GCCGCGGCAC TGTTCTCCAT GGCGGTAGTG
AACGACCGTA TCACCCGTTT TATCCGTGAT AACGAATTGC CTGTACTGAT GTTTGGTTTT
GGTGACTGTA CCGGTGGTGC GCAGGCGAGT TTTGTGACTC ACCCATTAGT GCAAACTTAC
TATCTGTCTG GTACTAACAT GCCATTCGCA GGTCAAATGG TGGTTCCTGC GTACTTACCA
TCGACGTCGA CACTGTCGAA TTACCTGTCG AAAGTACCTG GCGCAATGGC CGGCCTAGTC
CATAACCCAT TTAGCGAAAA CTTAGACAAT CAATTGGCGA GCATCGATCC ATTGATGCCA
ATGCCGACGG CTAAGATTAA TGAGGTTATC ATTAACGCCT TGTCAACACT GGTTGTAGAA
GCGCCAGCTG AAGAAGAGGA AATTGTACAA AACGATCCGC GTAAGCTGAT GAAACCAATC
AATAAAGTAT TGGTTCATGC CCGTGGTTGT ACCGCTGTTA AGTTGATCCG TAAAGCGCAT
GATAACAATA TCAACGTAGT ATTGGTGGCG TCAGATCCTG ATATGACCGC CGTACCTGCG
GATATGTTGA AAGAGTCTGA CAAGCTAGTC TGTTTAGGTG GTAACACCTC TGACGAAAGT
TACCTGAACG CATACTCAGT ACTCAAAGTG GCTGAATATG AGCAAGTTGA TGCACTGCAC
CCAGGTATCG GCTTCCTGTC TGAAAGCCCG CAATTTGCGG CATTGTGTGT CAACAATGGC
GTTAACTTTG TTGGCCCTAG CGTACATTCA ATGACGACTA TGGGTAACAA GTCGAACGCA
ATTAAGACAT CACAAGCGCA AAACGTGCCA GTGGTACCAG GTTCACACGG TATTTTGACT
AACGCTGAGC AAGCGGTAAA CGTAGCTAGT GAAATTGGTT ACCCAGTACT ACTCAAAGCG
GTACAAGGCG GTGGTGGTAA AGGTATCCAG GTCGTTAAAC GTCCTGAGGA TATGATTGGT
TTATTCCAAA AAACGGCTAC CGAAGCGGCT GCTGCTTTTG GTAACGGCGA TTTGTACTTA
GAAAAATATG TCACTTCACT GCGTCATATC GAAGTGCAGT TACTGCGCGA CAAGTTTGGT
CACGCTAAGG TTCTTGGTTT ACGTGACTGT TCTGTACAAC GTAACAACCA GAAAGTCGTT
GAGGAATCTG GCTCAACCAT GCTGCCAGAT GAACTGAAAA AACAAGTGCT GGCTTACACC
CGTGCCTTAG GTGATGCGAC CGATTACATG GGCGCAGGTA CTGTTGAGTT CATCTACAAC
TTAGACGCAA ACGAAGTGTA CTTCATGGAA ATGAACACCC GTCTGCAGGT AGAGCATCCA
GTAACTGAAG CGACTTCTGG TATCGATATT GTGAGCGCAC AATTTGATAT CGCAGCGGGT
CGTTCAATCG AGCACTTAGA GCCGAAAGAA ATCGGTTATG CGATGGAAGT GCGTGTAACG
GCTGAAAAAG CGGCACTCGA CAGCCATGGC GTACTTCAGT TGATCCCTAA TCCTGGCAAG
ATCACCGAAT GTGTATTCCC TGATCATCCA GATGTGGAAA TCATCTCGAT TGCCGCACCG
GGTAAAGAAG TATCACCTTA TTACGACAGC TTAATCGCTC AGGTGATTAT GCGCGGTGAA
AACCGTGAAG ACGTTATCGC GAAACTTCAT GCTTACCTCG ACAGCGTAGT GCTTAAAGGT
ATCGCGACTA ACATTCCATT GCTGAAACTG ATCTTAAGCG ATGGCACCTT CAAAGAAGGC
GTATACGATA CTAACTACCT GCCACGCTTT ATGGCTGAGC TAGACATTCC AGCGCTGATC
GCTGAAATGG AAGCCGCTGC CGAAACTGTT GGTGTGGATA CTGAGTCGCT CCGTGTGGGT
GAAAGTAACG AACTGAAAGT ATTAGCCCAA GGCGCAGGTA TCTTCTATAC CTCTCCAGCG
CCAGGCGAAC CTGATTTCGT GAAAGAAGGT GATATCGTTA CTGCTGAACA AACGCTTGCC
TTAACTGAAG CGATGAAGAT GTTCTCGCAG GTTAACTTAG CCGGCTTCAA CCGCCAAGGC
GCAGTACTCT ATCCAGAAGA TAAGAAGTAC CGCATTGAGC GTATTCTGAA CAGCAATGGT
CAGCAAGTAT CGCAAGGTGA CTTACTCTTC GTCGTATCGC CAGTTGAAGA TTAA
|
|---|
| Protein sequence | MTSNNQPKHM TQAQTPDPLF LQAEHLAKDF SLFPKHSKQS LSEEIKGLLN DDAIQANLKD
LASLDVDGYV AKVIQPTQDK GRPGAKRIIA DLKGRLITET HLGSFYSAEV ELNFGSRTRR
IGFIAQERTT ANGAWMPEHH YAACKAIRHF AELSMPIVYL IDTPGADAGE VANSQNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYT SGCIDGIIDF SPGDRDERQH NLRRAIISSI EAVERAAVNF
VRESKDLREH YDRSLARFLN PSKNLMALEL NAELAVATSP TNHHNLFGSA YRYLRYLTLR
SRIHSISQEQ YGRLSRVSVP EGDLLARIQQ EQDRVFQAWL ASPDKLVYDE DLNKLWANFI
AKRDEISTER NMLTRFILGE PKENYKKARK ALLFNISWSL YHRWKSNAAN NFKGLIQHLE
NLPKSVTQAK WPELNQLTVL DVVVNDELRE DFIWQCHNIL IFNSLYDNVV GSLASIAKEA
MMSKSLSRNS VNNLLHKSID HALSTQDTAN DKAKFYKWLK YFMGQSNRAD LLVRVEQWKS
VGFPQLNDSL FVILTYFFER LLPEYFDSES DHSKYTGAIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KRTGKMTWEN VIKQFFTHFD EINGDKMSAN LLNFPGFRLS IEDALDKGIR
PCGLITGIAD FKEKGQKVRV GLAVSNTAFQ AGAFDMASAE KFSALLIECA KRKLPVVCFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGF GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STSTLSNYLS KVPGAMAGLV HNPFSENLDN QLASIDPLMP
MPTAKINEVI INALSTLVVE APAEEEEIVQ NDPRKLMKPI NKVLVHARGC TAVKLIRKAH
DNNINVVLVA SDPDMTAVPA DMLKESDKLV CLGGNTSDES YLNAYSVLKV AEYEQVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQAQNVP VVPGSHGILT
NAEQAVNVAS EIGYPVLLKA VQGGGGKGIQ VVKRPEDMIG LFQKTATEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDKFG HAKVLGLRDC SVQRNNQKVV EESGSTMLPD ELKKQVLAYT
RALGDATDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSGIDI VSAQFDIAAG
RSIEHLEPKE IGYAMEVRVT AEKAALDSHG VLQLIPNPGK ITECVFPDHP DVEIISIAAP
GKEVSPYYDS LIAQVIMRGE NREDVIAKLH AYLDSVVLKG IATNIPLLKL ILSDGTFKEG
VYDTNYLPRF MAELDIPALI AEMEAAAETV GVDTESLRVG ESNELKVLAQ GAGIFYTSPA
PGEPDFVKEG DIVTAEQTLA LTEAMKMFSQ VNLAGFNRQG AVLYPEDKKY RIERILNSNG
QQVSQGDLLF VVSPVED
|
|---|
| |