Gene SO_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0835 
Symbol 
ID1168684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp852994 
End bp854151 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content51% 
IMG OID637342807 
Producthypothetical protein 
Protein accessionNP_716466 
Protein GI24372424 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGC CCAGCCTTGT TTTTATCCTT GCCAGCGCAA TTGCCCAAAC CGCAGGTGCA 
GTGCAACTCC TAGGGGATGT TGAAGTGTCT CGCATTGCCA CTGCGGAAAA AACCATGGCG
GAAGTGGTCA ATCGCTATCA AGCGTTGGAT GAAGGCTTAG CGTCCCAGTT ATTTGCTCAG
AAAAATGAGC GCGATGCGAC CCAACTTGCC GCCCGCCAAG GTCATAGGCT GTGGCAACAA
GCAGTGCGCG ATGTGCAATC AGGGCATTTT GACGACCGCT CTCTCTACTG GGCGCGACTC
GCTATGCTAA ACAGCCTGAA AACCCATAAC CCCAATTTTA ATATGGCCGA TTGGCAACAA
CAGATTTTGT CCAGCGCCGT CGAAAAAGCA TCACGGGGTT TTAGTGATAT TCAATATGGT
GACGATGTAC AAATTAAAAT CTTCCTCACC GGCTTCGACC CTTTCTTCCT CGATAAAGAT
ATCAGCCAAA GTAATCCTTC GGGTCTAACC GCCCTCGCCC TCGACGGTTT TCGATTTGAT
GTTAACGGTA AAAAGGCGCA AATCGAAACC GCGATGATCC CCGTGCGCTT CGAGGATTTC
GACCAAGGTA TTATCGAATC CCTGCTCAGC CCCGTTTATC GCGATCCTAA AACCCAATTG
GTGTTTACGG TTAGCATGGG GCGTAGCGAC TTTGACCTTG AACGCTTCCC TGGGCGTAAC
CGCAGCGCCG CTGCACCTGA TAACCAGAAT CTATATACCG GCGCCAGTAA AACCGCACCC
GTTGCCCCCA AACTCAATGG CAAAGACTTT GCCGGCCCTG AGTTTGTCGA GTTTTCGCTG
CCCGTAGCCG CGATGCAACT TAAAGACGGC CAGTGGAAAG TCAATGATAA CCACACGGTG
ACCACCCTAG GTCGCGGTGA GTTTAATGCC AGTTCATTAA GCGAGCTGCA AAATGAAACC
TCGGTCGAAG GCTCAGGTGG CGGTTATCTC TCTAATGAAA TATCCTATCG TGCTATCGTG
TTACAGCAAA AATTCAATAG CCACGCACAA GTTGGCCATA TCCACACTCC AAAGGTAAAA
GGCCATGACA GCGATACCGA GCACGCCATA GTCGAACATA TCCGCACTAT GGTGATGCAG
GCCGCAGCGA GTCTATAG
 
Protein sequence
MLKPSLVFIL ASAIAQTAGA VQLLGDVEVS RIATAEKTMA EVVNRYQALD EGLASQLFAQ 
KNERDATQLA ARQGHRLWQQ AVRDVQSGHF DDRSLYWARL AMLNSLKTHN PNFNMADWQQ
QILSSAVEKA SRGFSDIQYG DDVQIKIFLT GFDPFFLDKD ISQSNPSGLT ALALDGFRFD
VNGKKAQIET AMIPVRFEDF DQGIIESLLS PVYRDPKTQL VFTVSMGRSD FDLERFPGRN
RSAAAPDNQN LYTGASKTAP VAPKLNGKDF AGPEFVEFSL PVAAMQLKDG QWKVNDNHTV
TTLGRGEFNA SSLSELQNET SVEGSGGGYL SNEISYRAIV LQQKFNSHAQ VGHIHTPKVK
GHDSDTEHAI VEHIRTMVMQ AAASL