Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0826 |
Symbol | |
ID | 1168676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 841777 |
End bp | 843468 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637342799 |
Product | hypothetical protein |
Protein accession | NP_716457 |
Protein GI | 24372415 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGCCC CTGAACTCCT CGAGTTAAGC AGTGACAAAA GCCAGGCGGA ATTACGCCTG ATCCCTAAAG ATCATGGTCC TATCAACCGT GATGATGTGA TGCGCCTTTT GTCTCTCCCT GAGTTTTGTT TACTGCATCC GCTTGATCAG GCAATTGATA AAGTGGTCGC GCAAACCAAC ACCTTATGCA ATCAAGATAA GGGGAAATTT GAGCTGTTTG CCGTACTGGC GGAGCGCCGT GATGGTAGCG TTAAGATCGA AATCAGCCCT GATAAAATGC TCGCGACAAT GACCTTAACC GCACCTTGTG GAGGCAAAGC GGTCGACTTA CCAGAAATTC TCACTGAACT TAAAAAAAAC AATGTTTGCA TGGGGTTAAG CAAACTAAAA ATCCAAACCT TGCTACAAAA AATGACCAAA CTCAAACCCG GTAATAGCTG CAAAAATGAA ATAGCCCAAG GCAAACACGC CATAAACGGC CAAAATGCCG TACTGGAGCG TAAGGTGTCG CTGGCCCGTG AACGCTTACT CCAGCCACAG GAGCGGGAAG ACGGCACAGT CGATATGCGT AATCTTGGCT CCATGATTAT GGTCAAGCCC AACGATATTT TGATGATAAA ACACCCCGCG ACAGAAGGCT CCCCCGGTTA TAACATTAAG GGCGAAGTGA TTAAGCAAAA GCCAGGAAAA GATCTGCCAC TACAAGCAGG TACAGGTGCT GACTTCCATC CCAAAGATCC CAATAAACTC ATCGCAACAG TCGCAGGGCA ACCCGTTGAA ACCCGTACAG GCGTGAATGT CGATGACGTG TTACAGGTCA AAGACGTGGA CATCAGCACA GGTCATGTCA CCTTTAAAGG CAGTATTTTA ATCACTGGTG ACGTGCATGA GGGCATGATA GTGAAAAGTG CTGGTGACAT TACCGTCATG GGTTTTGTCG ATTCAGCCAC CCTTGAGGCG GAAGGTGATA TTACCGTCAG TAAAGGTGTG ATCGGCAGGC AAATTCGCGT CAATGAGTTT TCCACTAACC TCACAGCACA AGGACAGATC AGCGCCCAAT TTGTGCAATA TTCCCAATTA ACCGCGAAGG GGAATATTTT AATTACAAAA CAATTACTTC ATAGTAATAC CAAAACGGCT GGAACCCTGA CGGTAAGCGA TACCAGCGGC CGTCGTGGTG ACTTAATTGG TGGTATCGCC CATGCAGAAA AAGGGCTAAT TGCGGTCGCC ATTGGAGCTA CCGCTGGCAC TAAAACAGAA GTATTTTGTG CGATGGAGCA AGGTGAGCTC AAACAAAACC TTAAACACAT TGAAGAAAGT GTTCAGGCAA TGGTGCTTGC AACACTGGAT ATTGAGGCTC GGCTAAAAAA GCTACCGCCC AAATCGGAAT GGCAAAATGA TCCCGTGATG ATCGAGCAAA TTAAGATAAT GCTCGATGAG AAAAATCGCA TCTTGAATGA ACGTATCCGC GAAGAGCTTG AGTTTGACGG TCTAAAGCAA GAAGTTGAAA GCTATTTTGA TAAATACCAT ATCGACGTTA TTAAGCACGT CTTCCTCAAT GTCGAGTTTC ATATCGGCCA AGCCAATCAT AGAACGACCC GCGAACACGG CACTTGCTCG ATCTCCAATA TCAATCAAGA GATTAACTTT GATTACAATG CCAAGCCCAA GGCTCAAGGA GCCACAAATT AG
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Protein sequence | MLAPELLELS SDKSQAELRL IPKDHGPINR DDVMRLLSLP EFCLLHPLDQ AIDKVVAQTN TLCNQDKGKF ELFAVLAERR DGSVKIEISP DKMLATMTLT APCGGKAVDL PEILTELKKN NVCMGLSKLK IQTLLQKMTK LKPGNSCKNE IAQGKHAING QNAVLERKVS LARERLLQPQ EREDGTVDMR NLGSMIMVKP NDILMIKHPA TEGSPGYNIK GEVIKQKPGK DLPLQAGTGA DFHPKDPNKL IATVAGQPVE TRTGVNVDDV LQVKDVDIST GHVTFKGSIL ITGDVHEGMI VKSAGDITVM GFVDSATLEA EGDITVSKGV IGRQIRVNEF STNLTAQGQI SAQFVQYSQL TAKGNILITK QLLHSNTKTA GTLTVSDTSG RRGDLIGGIA HAEKGLIAVA IGATAGTKTE VFCAMEQGEL KQNLKHIEES VQAMVLATLD IEARLKKLPP KSEWQNDPVM IEQIKIMLDE KNRILNERIR EELEFDGLKQ EVESYFDKYH IDVIKHVFLN VEFHIGQANH RTTREHGTCS ISNINQEINF DYNAKPKAQG ATN
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