Gene SO_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0826 
Symbol 
ID1168676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp841777 
End bp843468 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content46% 
IMG OID637342799 
Producthypothetical protein 
Protein accessionNP_716457 
Protein GI24372415 
COG category[L] Replication, recombination and repair 
COG ID[COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCCC CTGAACTCCT CGAGTTAAGC AGTGACAAAA GCCAGGCGGA ATTACGCCTG 
ATCCCTAAAG ATCATGGTCC TATCAACCGT GATGATGTGA TGCGCCTTTT GTCTCTCCCT
GAGTTTTGTT TACTGCATCC GCTTGATCAG GCAATTGATA AAGTGGTCGC GCAAACCAAC
ACCTTATGCA ATCAAGATAA GGGGAAATTT GAGCTGTTTG CCGTACTGGC GGAGCGCCGT
GATGGTAGCG TTAAGATCGA AATCAGCCCT GATAAAATGC TCGCGACAAT GACCTTAACC
GCACCTTGTG GAGGCAAAGC GGTCGACTTA CCAGAAATTC TCACTGAACT TAAAAAAAAC
AATGTTTGCA TGGGGTTAAG CAAACTAAAA ATCCAAACCT TGCTACAAAA AATGACCAAA
CTCAAACCCG GTAATAGCTG CAAAAATGAA ATAGCCCAAG GCAAACACGC CATAAACGGC
CAAAATGCCG TACTGGAGCG TAAGGTGTCG CTGGCCCGTG AACGCTTACT CCAGCCACAG
GAGCGGGAAG ACGGCACAGT CGATATGCGT AATCTTGGCT CCATGATTAT GGTCAAGCCC
AACGATATTT TGATGATAAA ACACCCCGCG ACAGAAGGCT CCCCCGGTTA TAACATTAAG
GGCGAAGTGA TTAAGCAAAA GCCAGGAAAA GATCTGCCAC TACAAGCAGG TACAGGTGCT
GACTTCCATC CCAAAGATCC CAATAAACTC ATCGCAACAG TCGCAGGGCA ACCCGTTGAA
ACCCGTACAG GCGTGAATGT CGATGACGTG TTACAGGTCA AAGACGTGGA CATCAGCACA
GGTCATGTCA CCTTTAAAGG CAGTATTTTA ATCACTGGTG ACGTGCATGA GGGCATGATA
GTGAAAAGTG CTGGTGACAT TACCGTCATG GGTTTTGTCG ATTCAGCCAC CCTTGAGGCG
GAAGGTGATA TTACCGTCAG TAAAGGTGTG ATCGGCAGGC AAATTCGCGT CAATGAGTTT
TCCACTAACC TCACAGCACA AGGACAGATC AGCGCCCAAT TTGTGCAATA TTCCCAATTA
ACCGCGAAGG GGAATATTTT AATTACAAAA CAATTACTTC ATAGTAATAC CAAAACGGCT
GGAACCCTGA CGGTAAGCGA TACCAGCGGC CGTCGTGGTG ACTTAATTGG TGGTATCGCC
CATGCAGAAA AAGGGCTAAT TGCGGTCGCC ATTGGAGCTA CCGCTGGCAC TAAAACAGAA
GTATTTTGTG CGATGGAGCA AGGTGAGCTC AAACAAAACC TTAAACACAT TGAAGAAAGT
GTTCAGGCAA TGGTGCTTGC AACACTGGAT ATTGAGGCTC GGCTAAAAAA GCTACCGCCC
AAATCGGAAT GGCAAAATGA TCCCGTGATG ATCGAGCAAA TTAAGATAAT GCTCGATGAG
AAAAATCGCA TCTTGAATGA ACGTATCCGC GAAGAGCTTG AGTTTGACGG TCTAAAGCAA
GAAGTTGAAA GCTATTTTGA TAAATACCAT ATCGACGTTA TTAAGCACGT CTTCCTCAAT
GTCGAGTTTC ATATCGGCCA AGCCAATCAT AGAACGACCC GCGAACACGG CACTTGCTCG
ATCTCCAATA TCAATCAAGA GATTAACTTT GATTACAATG CCAAGCCCAA GGCTCAAGGA
GCCACAAATT AG
 
Protein sequence
MLAPELLELS SDKSQAELRL IPKDHGPINR DDVMRLLSLP EFCLLHPLDQ AIDKVVAQTN 
TLCNQDKGKF ELFAVLAERR DGSVKIEISP DKMLATMTLT APCGGKAVDL PEILTELKKN
NVCMGLSKLK IQTLLQKMTK LKPGNSCKNE IAQGKHAING QNAVLERKVS LARERLLQPQ
EREDGTVDMR NLGSMIMVKP NDILMIKHPA TEGSPGYNIK GEVIKQKPGK DLPLQAGTGA
DFHPKDPNKL IATVAGQPVE TRTGVNVDDV LQVKDVDIST GHVTFKGSIL ITGDVHEGMI
VKSAGDITVM GFVDSATLEA EGDITVSKGV IGRQIRVNEF STNLTAQGQI SAQFVQYSQL
TAKGNILITK QLLHSNTKTA GTLTVSDTSG RRGDLIGGIA HAEKGLIAVA IGATAGTKTE
VFCAMEQGEL KQNLKHIEES VQAMVLATLD IEARLKKLPP KSEWQNDPVM IEQIKIMLDE
KNRILNERIR EELEFDGLKQ EVESYFDKYH IDVIKHVFLN VEFHIGQANH RTTREHGTCS
ISNINQEINF DYNAKPKAQG ATN