Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0783 |
Symbol | |
ID | 1168638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 797421 |
End bp | 799409 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637342761 |
Product | hypothetical protein |
Protein accession | NP_716414 |
Protein GI | 24372372 |
COG category | [R] General function prediction only |
COG ID | [COG3972] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAGT ATTGTTTTTT TACCCCAGAA TCCTTAGCTC TAGCTGAATC AGCGGACTTG CAGGATACAC TTGAAAGTTA CGCTGACACG AATAAAAAGC AAATATACGT TCTAGCTCGC CCTCTTTCAA AAGAAGACTT AGAATATGAT TATGATAGTG CCTTCGTAAT ATTTTCCTCT GGTTCACACC CATGTTTTGT GAACGTATCA GATGATATTG ATAGCTTTGA AGACTATATT GAAGATTTTA TTGATGACAT TTCATTTTTA TCTGAAAAAT TTGATTACCG TAAAAAAATT GGTAGAAAAA AAGCATGGCA ACATCTATTT AGAGATGAAT CAAGTAATAG CTTAGATTTA GAAAGTTTAA AAATATCTAA CCCAGTAGAT AAAAGGGTAT CAGATTTGAT TACTTCATTG GTAATTGGAA GTATCAATGA TGTTTCAAAA ATCGATCTTG AAGCCACCAA TTTATTAGAT ACCATAAAAT CTAAAATTGT TCTTTTTGAT ACTGACCAAA CCAGTTTTTT ATTTAAAATG GGAAGAGGTA AAAAATTTGT AATCCAAGGT TTGGCAGGTT CTGGTAAAAC TGAATTGTTG CTACATAAAA TAAAAGAGCT CTACTCTAAT GAACAGGAAG CAAGAATTGC CTTTACATGC TTCAACAAAA TTTTAGCTTC AAATATGAAA GATCGCATCC CAGAGTTTTT CAACTTTATG AAAGTTGAGA AACAGATAGA ATGGGATAAA AAGCTTTTTT GCTTTAGTTC ATGGGGTAAC GGCCCAAAAC CTTACTCAGG AATGTATCGC TACATTTGCT ATAAATATGA AATCCCTTTT GGGACATTTC ACAATGGCTC CTTTGAAAAC CTCTGTAAAG AAGCAATCAA ACAAATTACA GAGCGAACTA AAGATGGTGA TAAAAAATAT ATTTTTGACT ATATTTTTAT TGATGAAAGC CAAGATTTTG GTGAAAGCTT TATAAATCTT TGTGAATTAA TAACAAAAAA TAAAATATTT GTGGCTGGTG ATGTTTTCCA AAATATTTTC AGACCTATAG ATGAATCTGC TAGCCGCGCA GATCTTCTTC TTAAGAAATG CTATCGAACA GATCCGAAAA ATCTTATGCT TTCACATGCA CTTGGAATGG GACTATATGA GAACCCTGTC TTACGATGGC TTAAAGATGA TGAATGGGCA GCTTGTGGAT ATAATTATGA GGAAATAAAT GGTAGGGCAA TAGTTAGTCG AGACCCATTA CGCAGATTTG AGGATATCCC AAATGAGTTT GAATCAACAT CAATTAATGT AATAAAAAAC AGTGCATCTA TAGCAAACTC CATTTTCGAA GTTATACAAA ATATAGTTGC TAGGTATGAA ACTGTAACTC CAGGTGATAT TGCTGTTCTA TTTTTAGATA AAGCTAACTA TATTTATGAT GAAATCCCTC GTTTAGCTCG TAAAGTTAGT GATGCCTATC AATGGAAAGT AAACATTTCT CATGAGAGTA AGAAGACTGA CTCTTCTAAA ATGTTTATAT CAAATATTAA TAATGCAAAA GGTTTAGAGT TTCCTTTCGT TATCTGCTTT GCTATGAATC TGCATAGAGG AACATATTTC AGGAATGGTC TTTATACGAT GATGGCTCGT TCTTTCTTAG AAAGCCACTT AGTAGTTAGT GAGCAGACTA GTGCTGAATT AGTGGTAGCT TTAAGAGCTG GAATGGACTG CATGAAAACC AATGGCTATA TGAATTTACG AATACCTTCA AATGAGGAAA TTGAGAGTCA AAATACAATG CTAGTTTGGG ATGAAACTCC ATCGATAGAA GACCTCGTGA AAGACTTCTG TGAAGAAAAA AGTGCAACAC CAAGATTGAG AGCAAAGTTA ATTCAACGCA TGAGCGAACT TATGGAAGAT GTTGAGTATG AAGAGGACTA CTTTATCAGT GTTCTCAATG CTGAGTATAA GCGGTTTGAA AAACTATGA
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Protein sequence | MSEYCFFTPE SLALAESADL QDTLESYADT NKKQIYVLAR PLSKEDLEYD YDSAFVIFSS GSHPCFVNVS DDIDSFEDYI EDFIDDISFL SEKFDYRKKI GRKKAWQHLF RDESSNSLDL ESLKISNPVD KRVSDLITSL VIGSINDVSK IDLEATNLLD TIKSKIVLFD TDQTSFLFKM GRGKKFVIQG LAGSGKTELL LHKIKELYSN EQEARIAFTC FNKILASNMK DRIPEFFNFM KVEKQIEWDK KLFCFSSWGN GPKPYSGMYR YICYKYEIPF GTFHNGSFEN LCKEAIKQIT ERTKDGDKKY IFDYIFIDES QDFGESFINL CELITKNKIF VAGDVFQNIF RPIDESASRA DLLLKKCYRT DPKNLMLSHA LGMGLYENPV LRWLKDDEWA ACGYNYEEIN GRAIVSRDPL RRFEDIPNEF ESTSINVIKN SASIANSIFE VIQNIVARYE TVTPGDIAVL FLDKANYIYD EIPRLARKVS DAYQWKVNIS HESKKTDSSK MFISNINNAK GLEFPFVICF AMNLHRGTYF RNGLYTMMAR SFLESHLVVS EQTSAELVVA LRAGMDCMKT NGYMNLRIPS NEEIESQNTM LVWDETPSIE DLVKDFCEEK SATPRLRAKL IQRMSELMED VEYEEDYFIS VLNAEYKRFE KL
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