Gene SO_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0783 
Symbol 
ID1168638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp797421 
End bp799409 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content34% 
IMG OID637342761 
Producthypothetical protein 
Protein accessionNP_716414 
Protein GI24372372 
COG category[R] General function prediction only 
COG ID[COG3972] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGT ATTGTTTTTT TACCCCAGAA TCCTTAGCTC TAGCTGAATC AGCGGACTTG 
CAGGATACAC TTGAAAGTTA CGCTGACACG AATAAAAAGC AAATATACGT TCTAGCTCGC
CCTCTTTCAA AAGAAGACTT AGAATATGAT TATGATAGTG CCTTCGTAAT ATTTTCCTCT
GGTTCACACC CATGTTTTGT GAACGTATCA GATGATATTG ATAGCTTTGA AGACTATATT
GAAGATTTTA TTGATGACAT TTCATTTTTA TCTGAAAAAT TTGATTACCG TAAAAAAATT
GGTAGAAAAA AAGCATGGCA ACATCTATTT AGAGATGAAT CAAGTAATAG CTTAGATTTA
GAAAGTTTAA AAATATCTAA CCCAGTAGAT AAAAGGGTAT CAGATTTGAT TACTTCATTG
GTAATTGGAA GTATCAATGA TGTTTCAAAA ATCGATCTTG AAGCCACCAA TTTATTAGAT
ACCATAAAAT CTAAAATTGT TCTTTTTGAT ACTGACCAAA CCAGTTTTTT ATTTAAAATG
GGAAGAGGTA AAAAATTTGT AATCCAAGGT TTGGCAGGTT CTGGTAAAAC TGAATTGTTG
CTACATAAAA TAAAAGAGCT CTACTCTAAT GAACAGGAAG CAAGAATTGC CTTTACATGC
TTCAACAAAA TTTTAGCTTC AAATATGAAA GATCGCATCC CAGAGTTTTT CAACTTTATG
AAAGTTGAGA AACAGATAGA ATGGGATAAA AAGCTTTTTT GCTTTAGTTC ATGGGGTAAC
GGCCCAAAAC CTTACTCAGG AATGTATCGC TACATTTGCT ATAAATATGA AATCCCTTTT
GGGACATTTC ACAATGGCTC CTTTGAAAAC CTCTGTAAAG AAGCAATCAA ACAAATTACA
GAGCGAACTA AAGATGGTGA TAAAAAATAT ATTTTTGACT ATATTTTTAT TGATGAAAGC
CAAGATTTTG GTGAAAGCTT TATAAATCTT TGTGAATTAA TAACAAAAAA TAAAATATTT
GTGGCTGGTG ATGTTTTCCA AAATATTTTC AGACCTATAG ATGAATCTGC TAGCCGCGCA
GATCTTCTTC TTAAGAAATG CTATCGAACA GATCCGAAAA ATCTTATGCT TTCACATGCA
CTTGGAATGG GACTATATGA GAACCCTGTC TTACGATGGC TTAAAGATGA TGAATGGGCA
GCTTGTGGAT ATAATTATGA GGAAATAAAT GGTAGGGCAA TAGTTAGTCG AGACCCATTA
CGCAGATTTG AGGATATCCC AAATGAGTTT GAATCAACAT CAATTAATGT AATAAAAAAC
AGTGCATCTA TAGCAAACTC CATTTTCGAA GTTATACAAA ATATAGTTGC TAGGTATGAA
ACTGTAACTC CAGGTGATAT TGCTGTTCTA TTTTTAGATA AAGCTAACTA TATTTATGAT
GAAATCCCTC GTTTAGCTCG TAAAGTTAGT GATGCCTATC AATGGAAAGT AAACATTTCT
CATGAGAGTA AGAAGACTGA CTCTTCTAAA ATGTTTATAT CAAATATTAA TAATGCAAAA
GGTTTAGAGT TTCCTTTCGT TATCTGCTTT GCTATGAATC TGCATAGAGG AACATATTTC
AGGAATGGTC TTTATACGAT GATGGCTCGT TCTTTCTTAG AAAGCCACTT AGTAGTTAGT
GAGCAGACTA GTGCTGAATT AGTGGTAGCT TTAAGAGCTG GAATGGACTG CATGAAAACC
AATGGCTATA TGAATTTACG AATACCTTCA AATGAGGAAA TTGAGAGTCA AAATACAATG
CTAGTTTGGG ATGAAACTCC ATCGATAGAA GACCTCGTGA AAGACTTCTG TGAAGAAAAA
AGTGCAACAC CAAGATTGAG AGCAAAGTTA ATTCAACGCA TGAGCGAACT TATGGAAGAT
GTTGAGTATG AAGAGGACTA CTTTATCAGT GTTCTCAATG CTGAGTATAA GCGGTTTGAA
AAACTATGA
 
Protein sequence
MSEYCFFTPE SLALAESADL QDTLESYADT NKKQIYVLAR PLSKEDLEYD YDSAFVIFSS 
GSHPCFVNVS DDIDSFEDYI EDFIDDISFL SEKFDYRKKI GRKKAWQHLF RDESSNSLDL
ESLKISNPVD KRVSDLITSL VIGSINDVSK IDLEATNLLD TIKSKIVLFD TDQTSFLFKM
GRGKKFVIQG LAGSGKTELL LHKIKELYSN EQEARIAFTC FNKILASNMK DRIPEFFNFM
KVEKQIEWDK KLFCFSSWGN GPKPYSGMYR YICYKYEIPF GTFHNGSFEN LCKEAIKQIT
ERTKDGDKKY IFDYIFIDES QDFGESFINL CELITKNKIF VAGDVFQNIF RPIDESASRA
DLLLKKCYRT DPKNLMLSHA LGMGLYENPV LRWLKDDEWA ACGYNYEEIN GRAIVSRDPL
RRFEDIPNEF ESTSINVIKN SASIANSIFE VIQNIVARYE TVTPGDIAVL FLDKANYIYD
EIPRLARKVS DAYQWKVNIS HESKKTDSSK MFISNINNAK GLEFPFVICF AMNLHRGTYF
RNGLYTMMAR SFLESHLVVS EQTSAELVVA LRAGMDCMKT NGYMNLRIPS NEEIESQNTM
LVWDETPSIE DLVKDFCEEK SATPRLRAKL IQRMSELMED VEYEEDYFIS VLNAEYKRFE
KL