Gene SO_0766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0766 
Symbol 
ID1168620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp779788 
End bp780609 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content46% 
IMG OID637342743 
ProductAraC/XylS family transcriptional regulator 
Protein accessionNP_716397 
Protein GI24372355 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGC TAAGAGATGG CCAAGATGTT ATTATTCAAC GGGATAACAC CACCTTTGAA 
CAATGGGCAA CGAATGGCGA GTATGTGCGC TATTTCCCCG TTGAAAAACG CTCAGTTACC 
TACCGTAAAG GGGATTTACG GGCGTTAAAT ATTCAGCACG ATCGCGAGCA GCTATATCAT 
GTGGTATCAC CAGCGCTGGC CACTAATATG GCGAAAACCA AGCTAAAACA GCTACCTTGC 
TTTGAGGCTA AGGGCTTTGC AGGCAAGGTC AATGGTATGG AGAGTCAACT TGATTGGATT 
GCTAGCATTG AACTGCCACA GCAATTTAAT CTAGGTAAGG TGCTGAGTTA TCGACTGATT 
ACGGTTGAGC CCTACAGCCA CGAGGCGTTT GTGGCATTAA CGCAGAGTTA TCAAGATATT 
GACTTTGCCG ATGTGGGTGA CAGCGAGTCA GATCCCTTTA TCGCCAAGAT GATTAACCAA 
GGTTTTATCG AACACGGCTG CAGTGGTTTT TATAGCAGTG AGGGTCATGC CATTGAGGTT 
CAAGGTGGTC ACGGCAATCA TTCGCACTAA
 
Protein sequence
MTPVEHINYW RHPNLSGIEL SQAEFTHFSF DKHVHLDYHL GVVTQGAQQF INKGSRYQLG 
QHGLSTLNPD ETHDGQSRDA EGYRVKVMSI PVDFMNAISQ EMGQATHFFN APMIDDSALY 
QYFIQLHNLL TQEQCTELAA ESHLLNFMQL LLTRHPAGTL KLGQDQGLSL QQLNLIKQKI 
HDEPWQNTQL EGLANEVNLS KFQFLRQFKQ ATGMTPHAYL KRVRLELAKK SLTHGTLVVD 
VAQQLGFFDQ SHLNKAFKQA FLLSPVQFQR RML