Gene SO_0643 details

Gene Information

• Locus tag: SO_0643
• ID: 1168504
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 670490
• End bp: 672637
• Gene Length: 2148 bp
• Protein Length: 715 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637342629
• Product: transposase, putative
• Protein accession: NP_716276
• Protein GI: 24372234

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAG CATGGTTCAG CCCTCAAGAG CTTCTGCAAT TACCTGGCAT GCCTACAACC 
GTTCAGGGTA TCAGGTTTAA AGCAAAGACA GAAAGCTGGG AGTCCAGAAA GAAAGAGGGT 
AGCAAAGGAT TTGAATACCA TCTTGGTAGC CTTCCACCTA TCACTCAGGC GCATCTTCGT 
CAGCAAGCCG TAAAAAATAC GACAAGCCGA GAAGTCGCAG CCGCACGCCA ATTGATAGCA 
ACGCCAGCAA GTCAGCTGGT TAAAAAAACG GAATTACAAC AGCAATTTTT AACGCTGCCT 
AAAGCGAAAC AACAAGTCGC GATGGAGCGC CAGCTGCTAC TCAATGATAT GGCAAATTTC 
ATCGCTCCCT TTGTTGAGGC TGGTCGCCGC ACTGAAGGCG TCATGGTATT TGCTAAACAG 
TGCAACCAAT CAAAAGCCAC TCTATATCGC TGGCAAAAAG CCTATGACGA AAAAGGATTA 
ATGGGCCTGG TTGATACTCG GGGCGGTGCG CAAGTCAGCG TGATGGAAGA TCAAAAAGAC 
CTGCAACAAT TCTTAATTGC TTTAGTCACG GGCAAGCCGC ATTTGCTCGA AAAATACAAA 
GTCCAGCAGC AAGAAGCACA AAAGAAAGCC GCAGAACATG GCTGGATTGT CCCTTCAATT 
GGCTCAATCC GTCGTTGGAT AAGTCGCTGG CATAGCGACA ACATCGCCGC GTTTACCGCG 
CTAACCAATC CCGATGCGTA CAATAACTCG CACCGCCCAC TCTACGGCAC CATGTACCCA 
TGGCTCAGTG GCCCTAATCA AGTTTGGGAG TTCGACAGCA CACCAACGGA TGTCATGCTC 
AATGCTCACG GCAAACTGCG TCGCTATGCC GTTGTAGCCG CGATTGATGT TTATACCCGC 
CGCCCCATGG TCTTAGTCAC CCCAACCTCT AACGCCGAAG GCATCTGCCT ATTACTGCGT 
CGCTGCCTAC TTAACTGGGG CATGCTGGAA GCCGATGGGG TTGCACGTAC CGACAACGGT 
TCTGACTATG TCAGCCTAAG AGTAAGTGGC ATTTTCGATA TCTTAGGTAT CGACCAATCC 
CGCACCCGCC CATTTAGTGG ATGGGAAAAG CCCTATATCG AGCGTTTCTT CGGCACATTA 
AGCCGCGCCC TGTTTGAGTT GTTGCCTGCT TATATTGGCC ATAACGTCAG TGATCGTCAG 
CAAATCGAAT CTGCCAAAGC CTTTGCCCAA CGGATTGGCG GCAAAAACAA GGCCGCCAAT 
AAAGAAGAAG CTTTATCAGT GGCCATGACG CCAGAAGCAC TGCAAAAGAT GATCGATGAC 
TGGATTCAAT ATGACTACAT GCACCAGGTG CATGAAGGCT TTAAAGGCGC GTTAAAAGGT 
AAAACGCCCT TTACAGTCAT GAGCGAAAGC GCCTATGTCG CTAACCGTAT CGCCAATCCC 
CATGCCCTCG ACTTATTACT TAACCATGTT GGTGATGCCA CTGTGATTCG CGGTAGCGTG 
AGTGCAGGCA ATATCCGCTA TACGGCCCCC GAACTTCAAG AAAGTCTCTG GGACAGAAAA 
CGGGTGCGCG TATTCCTCGA TCCTTCCGAT GTTGGCCGCG CGACTCTATA TGCCCTCGAT 
AACTGGCAGC AATGCGTCGA TGCAGTGAAT TTAGATCTGA TTGGCCGCGA TATCGATCCA 
GCAGCCTTTC GCAAAGCCCG CAATGAAGAT AAGAAAGTAC TCGCCAGCTT CCGCCGCGCA 
GCACGGGAGC TACAAGAAAA ATTTGGCATC GATACCTTGG CAGCCGAAGG CTTGGCCAAA 
GCCGCAGCCG AACGTGGCAG CCTAACCAGT TTCACCCCTA AACCGACTAC CACCGATAAC 
CCTGCACTGG CTGCACTTGC ACAAGCCAGC AGCGATAGCG ATCAGCAACT CGCCAGCTTA 
AGCCACCAAG CTCAAGCCAT TAGCGCGGCA GCCCAAAGGG TTAACCAAAA TCACGCCACG 
GTCATGCGCA CCGAACACGA AAAAGCCGAA GAGTTAACTC TAGCAACGCT TGAGCGTGAG 
CTAAGTGAGC GTGAAAAGTT ATGGCTAAAA GAATACCGCC TCAAATACCG CATGTTTGCC 
GCAAGGCTCG ACAGGCAATT AGAGGAGACG AAAAAAGCCG CCAAGTAG 

 

Protein sequence

MNKAWFSPQE LLQLPGMPTT VQGIRFKAKT ESWESRKKEG SKGFEYHLGS LPPITQAHLR 
QQAVKNTTSR EVAAARQLIA TPASQLVKKT ELQQQFLTLP KAKQQVAMER QLLLNDMANF 
IAPFVEAGRR TEGVMVFAKQ CNQSKATLYR WQKAYDEKGL MGLVDTRGGA QVSVMEDQKD 
LQQFLIALVT GKPHLLEKYK VQQQEAQKKA AEHGWIVPSI GSIRRWISRW HSDNIAAFTA 
LTNPDAYNNS HRPLYGTMYP WLSGPNQVWE FDSTPTDVML NAHGKLRRYA VVAAIDVYTR 
RPMVLVTPTS NAEGICLLLR RCLLNWGMLE ADGVARTDNG SDYVSLRVSG IFDILGIDQS 
RTRPFSGWEK PYIERFFGTL SRALFELLPA YIGHNVSDRQ QIESAKAFAQ RIGGKNKAAN 
KEEALSVAMT PEALQKMIDD WIQYDYMHQV HEGFKGALKG KTPFTVMSES AYVANRIANP 
HALDLLLNHV GDATVIRGSV SAGNIRYTAP ELQESLWDRK RVRVFLDPSD VGRATLYALD 
NWQQCVDAVN LDLIGRDIDP AAFRKARNED KKVLASFRRA ARELQEKFGI DTLAAEGLAK 
AAAERGSLTS FTPKPTTTDN PALAALAQAS SDSDQQLASL SHQAQAISAA AQRVNQNHAT 
VMRTEHEKAE ELTLATLERE LSEREKLWLK EYRLKYRMFA ARLDRQLEET KKAAK