Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0641 |
Symbol | |
ID | 1168503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 669361 |
End bp | 670083 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637342628 |
Product | prophage MuSo1, Cro/CI family transcriptional regulator |
Protein accession | NP_716274 |
Protein GI | 24372232 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACACTA AAAAAGAAAG TGCACTTTCT TTTCCGTCGG CTGGAATAGA AAGCTTTGGA GAGCGTCTTA AAGAACTGAT GGGCGACGAA AGCCTCAGAG CATTTGCGAA TGCTATCGAC ACCTCAGAAG GCGGTGTTCG TAAGTGGTTT ACTCAGTCGA CTATGCCCTC GTTTGATAAG ATGGTTCGTA TTGCTCGCCG TTATAATGTC AATCTCGAAT GGCTATGTAC TGGTGAAGGC CCTAAATTCC CAGGCGAAAC TGCGGCATAT GAAAGTGTGA TTTGTAAGAC TGAAGAGTTC TCAGAAGAAT ATGCACTTAT CGATGGCTAC CATACTCAAG TGAGTACAGG CCATGGTGCA CAATGGGATA ATGAACGAGT TAGACGCAAA CTAGCCTTTA GATCGAAATG GTTGCGTTAC CGAGGGTTAC AGCCTGAAAA CCTGCGGGTG GTTTTCGCGA AGGGTGACTC AATGGAACCA ACGATCCATT CTGGCGACTC GATCCTGGTG GATATCACTG ACGCAAATCT TTCTGACGGC AGTATTTTTG TCCTGCGCAT TGGGGATGAT TTGTTTGCTA AGCGTGTTCA AGTCCATATC GATGGCAGCA TCACGATCAT TAGCGACAAT AAAGAGTACA GAGAGCAGCG GGTGCCTGTT GCAGAACTTG GCCTACTGAG TGTAGTTGGC AAGGTTGTGT GGATAGGTAA GGACGTGAAG TAA
|
Protein sequence | MNTKKESALS FPSAGIESFG ERLKELMGDE SLRAFANAID TSEGGVRKWF TQSTMPSFDK MVRIARRYNV NLEWLCTGEG PKFPGETAAY ESVICKTEEF SEEYALIDGY HTQVSTGHGA QWDNERVRRK LAFRSKWLRY RGLQPENLRV VFAKGDSMEP TIHSGDSILV DITDANLSDG SIFVLRIGDD LFAKRVQVHI DGSITIISDN KEYREQRVPV AELGLLSVVG KVVWIGKDVK
|
| |