Gene SO_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0625 
Symbol 
ID1168491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp651800 
End bp652579 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content49% 
IMG OID637342616 
Producthypothetical protein 
Protein accessionNP_716258 
Protein GI24372216 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATACA GGCAATGGGT TTTGGGTGCA GGATTCACTT TATCCGTAGG ATTAAGTTCT 
GTTGCACACG CATTTTCTAT CCCGCAGCCA GCAAATGAAA TTGCGGCGAG TAAATTTGTG
CATATTCAAG TTCAGGCAGA GCAAGGTGAT GCCGATGCGC AATTTTTACT AGGACTCATG
TTTCTCTCTG GGCGTTATGT GCAGCAAGAG GTGCCATCTG GACTCCACTG GATAACCCTC
GCTGCCGAGC AGCAACACGA AAAAGCCCAG CAAACCTTGG CGGATCTCTC CTTTGAAGGC
CAGTTGATTA AACGTGACCT AGCCGTGGCC GAACGTTGGT ATAAAGATAT GGGTGAACGT
GGCAACCGTT GGGCACAGTT CCGTTTAGGT TTTATTTACG CTTCGGGTGG CGATGGTGTT
AAGCGCAACT GTGGCAAAGC GGTCGAGCAA TTTACCCGTG TTGGCGATGA TATTGCTCTT
GGCAATGTAG CTTGGATTCT CGCAACCTGT CCAGAAGCCG AATATCGTGA TGGTAATAAA
GCGCTTGAGT TATCTCTGCA ACTCCTAAAG GTCAACGAAA ACGATCCGAC GAATCTCGAC
AACTTAGCTG CGGCTTATGC GGAAGTGGGT GATTTTGGCG CTGCGGTTTC GACACAGCAA
AAAGCGATTG CTGCTTTGAA GATGACCGCT GAAGCGACTA AAACCGATGA GTTTAAACAG
CGTTTACACA GCTATGAGCA AAAACGGGCC TACCGTGAGA CGCTGCGTTT GCTTGAGTAG
 
Protein sequence
MKYRQWVLGA GFTLSVGLSS VAHAFSIPQP ANEIAASKFV HIQVQAEQGD ADAQFLLGLM 
FLSGRYVQQE VPSGLHWITL AAEQQHEKAQ QTLADLSFEG QLIKRDLAVA ERWYKDMGER
GNRWAQFRLG FIYASGGDGV KRNCGKAVEQ FTRVGDDIAL GNVAWILATC PEAEYRDGNK
ALELSLQLLK VNENDPTNLD NLAAAYAEVG DFGAAVSTQQ KAIAALKMTA EATKTDEFKQ
RLHSYEQKRA YRETLRLLE