Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0625 |
Symbol | |
ID | 1168491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 651800 |
End bp | 652579 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342616 |
Product | hypothetical protein |
Protein accession | NP_716258 |
Protein GI | 24372216 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATACA GGCAATGGGT TTTGGGTGCA GGATTCACTT TATCCGTAGG ATTAAGTTCT GTTGCACACG CATTTTCTAT CCCGCAGCCA GCAAATGAAA TTGCGGCGAG TAAATTTGTG CATATTCAAG TTCAGGCAGA GCAAGGTGAT GCCGATGCGC AATTTTTACT AGGACTCATG TTTCTCTCTG GGCGTTATGT GCAGCAAGAG GTGCCATCTG GACTCCACTG GATAACCCTC GCTGCCGAGC AGCAACACGA AAAAGCCCAG CAAACCTTGG CGGATCTCTC CTTTGAAGGC CAGTTGATTA AACGTGACCT AGCCGTGGCC GAACGTTGGT ATAAAGATAT GGGTGAACGT GGCAACCGTT GGGCACAGTT CCGTTTAGGT TTTATTTACG CTTCGGGTGG CGATGGTGTT AAGCGCAACT GTGGCAAAGC GGTCGAGCAA TTTACCCGTG TTGGCGATGA TATTGCTCTT GGCAATGTAG CTTGGATTCT CGCAACCTGT CCAGAAGCCG AATATCGTGA TGGTAATAAA GCGCTTGAGT TATCTCTGCA ACTCCTAAAG GTCAACGAAA ACGATCCGAC GAATCTCGAC AACTTAGCTG CGGCTTATGC GGAAGTGGGT GATTTTGGCG CTGCGGTTTC GACACAGCAA AAAGCGATTG CTGCTTTGAA GATGACCGCT GAAGCGACTA AAACCGATGA GTTTAAACAG CGTTTACACA GCTATGAGCA AAAACGGGCC TACCGTGAGA CGCTGCGTTT GCTTGAGTAG
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Protein sequence | MKYRQWVLGA GFTLSVGLSS VAHAFSIPQP ANEIAASKFV HIQVQAEQGD ADAQFLLGLM FLSGRYVQQE VPSGLHWITL AAEQQHEKAQ QTLADLSFEG QLIKRDLAVA ERWYKDMGER GNRWAQFRLG FIYASGGDGV KRNCGKAVEQ FTRVGDDIAL GNVAWILATC PEAEYRDGNK ALELSLQLLK VNENDPTNLD NLAAAYAEVG DFGAAVSTQQ KAIAALKMTA EATKTDEFKQ RLHSYEQKRA YRETLRLLE
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